New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Mity v1.1.0 #237

Open

anjalijain22 wants to merge 5 commits into master from mity_v1.1.0

Contributor

anjalijain22 commented Jan 13, 2025

Upgrade mity to v1.1.0
Replaced mity call, normalize and annotate with run_mity that does the job of all three rules in one go.
Added a new generate_mt_report rule

To Do:

Perform validation
Make code changes for compatibility in CHEO-RI

anjalijain22 added 5 commits

January 3, 2025 10:51


          Update location of new mity package

145e64f


          Update mity package location in config

f25ebbd


          Replace all mity rules/wrappers/envs with new run_mity rule/wrappers/…

94c4565

…envs


          Add rule and scripts to generate mitochondrial report

09850e7


          Remove the custom vcfanno argument from wrapper, clean up mt_report.p…

c40e27c

…y script

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet