0.3.0pos2 #217
Workflow file for this run
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| name: build_documentation | |
| # build the documentation for a new release | |
| on: | |
| release: | |
| types: created | |
| # # for debugging | |
| # on: [push, pull_request] | |
| # security: restrict permissions for CI jobs. | |
| permissions: | |
| contents: read | |
| # NOTE: importing of napari fails with CI and I am not quite sure why | |
| # I tried to adjust it based on the napari CI tests, but that didn't seem to help | |
| # https://github.com/napari/napari/blob/main/.github/workflows/test_comprehensive.yml | |
| jobs: | |
| # Build the documentation and upload the static HTML files as an artifact. | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v2 | |
| - name: Setup miniconda | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: sam | |
| mamba-version: "*" | |
| auto-update-conda: true | |
| environment-file: .github/doc_env.yaml | |
| python-version: ${{ matrix.python-version }} | |
| auto-activate-base: false | |
| env: | |
| ACTIONS_ALLOW_UNSECURE_COMMANDS: true | |
| - name: Install package | |
| shell: bash -l {0} | |
| run: pip install --no-deps -e . | |
| # We use a custom build script for pdoc itself, ideally you just run `pdoc -o docs/ ...` here. | |
| - name: Run pdoc | |
| shell: bash -l {0} | |
| run: pdoc --docformat google --logo "https://raw.githubusercontent.com/computational-cell-analytics/micro-sam/master/doc/images/micro-sam-logo.png" -o docs/ micro_sam | |
| - uses: actions/upload-pages-artifact@v1 | |
| with: | |
| path: docs/ | |
| # Deploy the artifact to GitHub pages. | |
| # This is a separate job so that only actions/deploy-pages has the necessary permissions. | |
| deploy: | |
| needs: build | |
| runs-on: ubuntu-latest | |
| permissions: | |
| pages: write | |
| id-token: write | |
| environment: | |
| name: github-pages | |
| url: ${{ steps.deployment.outputs.page_url }} | |
| steps: | |
| - id: deployment | |
| uses: actions/deploy-pages@v2 |