Code

Add Joint Training#288

Code

Merged

constantinpape merged 16 commits intodevcomputational-cell-analytics/micro-sam:devfrom joint-trainingcomputational-cell-analytics/micro-sam:joint-trainingCopy head branch name to clipboardDec 20, 2023

+579-68

Commits

Commits on Dec 14, 2023

• Update SamTrainer

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  3bd88bb

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• Fix interactive train iteration

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  7f16cf5

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• WIP - Add trainer for joint training

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• Update mentions

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Commits on Dec 16, 2023

• Fix joint trainer

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  fe940f5

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• Update mentions

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• Fix image encoder ini

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Commits on Dec 18, 2023

• Update joint training

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• Fix label type in dataloaders

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Commits on Dec 19, 2023

• Add checkpoint saving for unetr model state

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• Add unetr inference script

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Commits on Dec 20, 2023

• Update metric tracking for instance iteration

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• Fix argument spelling

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  be0adbf

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• (tmp) Update unetr to save decoder params

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  098c9fa

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• Update unetr model param loading

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  4decb3e

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• Update unetr automatic instance seg inference

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