Use macos-latest runner instead of deprecated macos-12 #381
Annotations
2 errors and 5 warnings
Run Snakemake
Process completed with exit code 1.
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Install R (macOS)
No such keg: /opt/homebrew/Cellar/[email protected]
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Set up conda
'nodefaults' channel detected: will remove 'defaults' if added implicitly. In the future, 'nodefaults' as a way of removing 'defaults' won't be supported. Please set 'conda-remove-defaults' = 'true' to remove this warning.
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Set up conda
/Users/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Install R (macOS)
pkgconf 2.3.0_1 is already installed and up-to-date.
To reinstall 2.3.0_1, run:
brew reinstall pkgconf
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Install R (macOS)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated
dependents or dependents with broken linkage!
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Upload artifact
No files were found with the provided path: example_data/output/Rout/*.Rout. No artifacts will be uploaded.
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