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84 Open 410 Closed
84 Open 410 Closed
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Issues list

Breakpoints of SVs
#532 opened Nov 25, 2024 by reshu23
2
Ref base always 'N', despite providing --reference FASTA
#531 opened Nov 20, 2024 by bbimber
Dramatic change in GTs with smaller size DEL SV
#530 opened Nov 20, 2024 by tuannguyen8390
6
Very high proportion 0/1 genotype in DUP, BND and INV
#529 opened Nov 15, 2024 by hui-liu
masked regions
#525 opened Nov 12, 2024 by askleppe
1
sniffles 2.5 produces variant longer than contig
#522 opened Nov 11, 2024 by bbimber
5
Usage of Sniffles2 for direct RNA sequencing output
#517 opened Nov 5, 2024 by kaltinel
1
bug: BND evidence from supplementary alignements discarded (sometimes)
#513 opened Oct 23, 2024 by yfarjoun
Type of BND connection mislabeled enhancement
#510 opened Sep 20, 2024 by ryan-moreno
@lfpaulin
false genotyping large deletion enhancement
#505 opened Aug 13, 2024 by DHmeduni 2.5
@lfpaulin
14
Are calls made from supplementary alignments? bug
#502 opened Aug 3, 2024 by jo-mc 2.6
2
Invalid END position
#497 opened Jul 18, 2024 by ACEnglish
@hermannromanek
3
Difference between SUPPORT, DV and RNAMES
#496 opened Jul 17, 2024 by kamilafras
3
Phailed SV phasing
#488 opened Jun 21, 2024 by agatafant
1
Detection of Reciprocal BNDs
#486 opened Jun 11, 2024 by Carly-KT
Significantly reduced DEL SUPPORT bug
#484 opened Jun 5, 2024 by weishwu
5
Large deletion filtered out enhancement
#479 opened May 10, 2024 by sumudu-rangika
@lfpaulin
3
Overcalling BNDs?
#472 opened Apr 11, 2024 by tsneddon
1
how sniffles reflect Cell heterogeneity question
#467 opened Apr 5, 2024 by Davidseye
3
Force Calling Errors bug
#465 opened Apr 2, 2024 by ACEnglish
@hermannromanek
2
How to make sniffles do a better job in splitting insertions at the same location into two het calls?
#460 opened Mar 6, 2024 by ymcki
1
Can Sniffles2 detect SV variants which have no spanning reads covering the whole variant?
#459 opened Mar 1, 2024 by vyx-lucy-kaplun
11
How to reduce memory consumption during population calling?
#448 opened Jan 8, 2024 by tnguyengel 2.5
@hermannromanek
12
Enhancement: sample ID handling enhancement
#443 opened Dec 1, 2023 by ptrebert
2
Compatibility issue for consensus creation
#442 opened Nov 27, 2023 by Mossy-Frog
6
ProTip! Find all open issues with in progress development work with linked:pr.