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hiccorrectmatrix: is writing to input file (#4670)
* hiccorrectmatrix: is wrinting to input file so we need to copy it * skip from_workdir * fix URLs * workaround for a bug regarding parallel processing that will be fixed in 3.7 * add missing options to CLI see #4085 * more fixes: - redundant name and argument - 1 wrong parameter name in test - 1 wrong option value and one missing option text * fix duplicated output labels
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