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Add sars anvil tutorial #4250

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Jul 10, 2023
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853ce2e
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nakucher Jul 2, 2023
935a145
add-sars-in-anvil-screenshots
nakucher Jul 2, 2023
6c093f5
add-links-for-images
nakucher Jul 2, 2023
8b8b50c
update-contributors.yaml
nakucher Jul 2, 2023
77db020
update-contributors.yaml
nakucher Jul 2, 2023
b4cd870
add-time-estimation
nakucher Jul 2, 2023
f5ab929
add-billing-info
nakucher Jul 2, 2023
61e378e
add-conclusion
nakucher Jul 2, 2023
0f4c153
Update topics/sequence-analysis/tutorials/sars-with-galaxy-on-anvil/t…
nakucher Jul 4, 2023
624f163
Update topics/sequence-analysis/tutorials/sars-with-galaxy-on-anvil/t…
nakucher Jul 4, 2023
21dbcf4
add-funder-update-toc
nakucher Jul 4, 2023
f95636f
add-qc-faqs
nakucher Jul 4, 2023
9df64c4
fix-funding-key
nakucher Jul 4, 2023
51db45f
test-<figure>-for-yt-video-lint
nakucher Jul 4, 2023
4b04e8d
fix-video-target
nakucher Jul 4, 2023
ad69e96
add-zenodo-and-minor-fixes
nakucher Jul 4, 2023
06b2927
Merge branch 'galaxyproject:main' into add-sars-anvil-tutorial
nakucher Jul 4, 2023
c4e3476
Merge branch 'main' into add-sars-anvil-tutorial
nakucher Jul 10, 2023
efa1c32
add-tag
nakucher Jul 10, 2023
d2c53b4
fix-image-links
nakucher Jul 10, 2023
8d80c23
Update topics/sequence-analysis/tutorials/sars-with-galaxy-on-anvil/t…
nakucher Jul 10, 2023
851b0c2
Update topics/sequence-analysis/tutorials/sars-with-galaxy-on-anvil/t…
nakucher Jul 10, 2023
ccc4b22
Update topics/sequence-analysis/tutorials/sars-with-galaxy-on-anvil/t…
nakucher Jul 10, 2023
8ac91d1
Update topics/sequence-analysis/tutorials/sars-with-galaxy-on-anvil/t…
nakucher Jul 10, 2023
834151f
Update topics/sequence-analysis/tutorials/sars-with-galaxy-on-anvil/t…
nakucher Jul 10, 2023
c171a91
Update topics/sequence-analysis/tutorials/sars-with-galaxy-on-anvil/t…
nakucher Jul 10, 2023
35a7b5d
Update topics/sequence-analysis/tutorials/sars-with-galaxy-on-anvil/t…
nakucher Jul 10, 2023
bebaf80
Detect both flavours of bad tool links
hexylena Jul 10, 2023
14f6f74
fix gtn link detection
hexylena Jul 10, 2023
96a7ccc
Extract quality score into its own FAQ
hexylena Jul 10, 2023
4f14145
Use new FAQ
hexylena Jul 10, 2023
e8479e1
fix-tool-link
nakucher Jul 10, 2023
cd20bd4
fix qc linting complaints
hexylena Jul 10, 2023
efa9c8a
missed one
hexylena Jul 10, 2023
ac9aade
ensure it does not crash if provided EN
hexylena Jul 10, 2023
1c2d1c4
fix-fastqc-tool-id
nakucher Jul 10, 2023
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53 changes: 52 additions & 1 deletion CONTRIBUTORS.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -163,6 +163,10 @@ aurelienmoumbock:
twitter: FMoumbock
joined: 2022-02

avahoffman:
name: Ava Hoffman
joined: 2023-06

avani-k:
name: Avani Khadilkar
email: [email protected]
Expand Down Expand Up @@ -291,6 +295,10 @@ CameronFRWatson:
email: [email protected]
orcid: 0000-0002-6942-2469

cansavvy:
name: Candace Savonen
joined: 2023-06

cat-bro:
name: Catherine Bromhead
matrix: 'cat-bro:matrix.org'
Expand Down Expand Up @@ -376,6 +384,10 @@ cstritt:
name: Christoph Stritt
joined: 2022-03

cutsort:
name: Frederick Tan
joined: 2023-06

d-salgado:
name: David Salgado
joined: 2022-10
Expand Down Expand Up @@ -447,6 +459,10 @@ eancelet:
joined: 2021-01
elixir_node: fr

ehumph:
name: Elizabeth Humphries
joined: 2023-06

ElectronicBlueberry:
name: Laila Los
joined: 2023-04
Expand Down Expand Up @@ -818,6 +834,10 @@ jsaintvanne:
name: Julien Saint-Vanne
joined: 2020-01

jtleek:
name: Jeffrey T. Leek
joined: 2023-06

jxtx:
name: James Taylor
joined: 2018-06
Expand All @@ -826,6 +846,10 @@ jxtx:

His impacts on the Galaxy community, have been incredible, and his loss is keenly felt.

katherinecox:
name: Katherine Cox
joined: 2023-06

katrinleinweber:
name: Katrin Leinweber
email: [email protected]
Expand Down Expand Up @@ -1120,6 +1144,11 @@ nagoue:
orcid: 0000-0003-2750-1473
joined: 2019-07

nakucher:
name: Natalie Kucher
email: [email protected]
joined: 2023-06

natefoo:
name: Nate Coraor
matrix: 'natefoo:matrix.org'
Expand Down Expand Up @@ -1334,6 +1363,10 @@ robertmand:
joined: 2021-10
elixir_node: uk

robertmeller:
name: Robert Meller
joined: 2023-06

reginaesinamabotsi:
name: Regina Esinam Abotsi
joined: 2018-06
Expand Down Expand Up @@ -1782,6 +1815,24 @@ elixir-converge:
funding_statement: |
ELIXIR CONVERGE is connecting and align ELIXIR Nodes to deliver sustainable FAIR life-science data management services. This project has received funding from the European Union's Horizon 2020 research and innovation programme under grant agreement № 871075

nhgri-gdscn:
name: National Human Genome Research Institute Genomic Data Science Community Network
github: false
joined: 2023-06
avatar: https://www.genome.gov/themes/custom/nhgri/assets/global/NHGRI-logo.svg
url: https://www.genome.gov/
funder: true
funding_id: 75N92022P00232
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Looking for the funding IDs I find links like
https://reporter.nih.gov/search/15E8C00F4784C1D77598B8961CAA4A01A2FFCEB861BF/projects?shared=true&legacy=1&sl=15E8C00F4784C1D77598B8961CAA4A01A2FFCEB861BF

but that seems to be broken, hmm. Normally we link out to those pages but here I'm not sure it's possible which is unfortunate

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Hmm yes it looks like RePORTER has been down for a little while :(


nhgri-anvil:
name: National Human Genome Research Institute Genomic Data Science Analysis, Visualization, and Informatics Lab-Space
github: false
joined: 2023-06
avatar: https://www.genome.gov/themes/custom/nhgri/assets/global/NHGRI-logo.svg
url: https://www.genome.gov/Funded-Programs-Projects/Computational-Genomics-and-Data-Science-Program/Genomic-Analysis-Visualization-Informatics-Lab-space-AnVIL
funder: true
funding_id: U24HG010263

ai4life:
name: AI4Life
github: false
Expand All @@ -1793,4 +1844,4 @@ ai4life:
funding_system: cordis
funding_statement: |
AI4Life has received funding from the European Union’s Horizon Europe research and innovation programme under grant agreement number 101057970.

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