Merge pull request #728 from bernt-matthias/topic/eggnot_search_noannot

skip annotation for search mode
galaxyproteomics · Sep 7, 2023 · 1927792 · 1927792
2 parents 468bd31 + 10ab973
commit 1927792
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diff --git a/tools/eggnog_mapper/eggnog_macros.xml b/tools/eggnog_mapper/eggnog_macros.xml
@@ -1,7 +1,7 @@
 <?xml version="1.0"?>
 <macros>
    <token name="@TOOL_VERSION@">2.1.8</token>
-   <token name="@VERSION_SUFFIX@">3</token>
+   <token name="@VERSION_SUFFIX@">4</token>
    <token name="@EGGNOG_DB_VERSION@">5.0.2</token>
    <token name="@PROFILE@">22.01</token>
     <!--

diff --git a/tools/eggnog_mapper/eggnog_mapper/eggnog_mapper_search.xml b/tools/eggnog_mapper/eggnog_mapper/eggnog_mapper_search.xml
@@ -7,6 +7,7 @@
     <expand macro="version_command"/>
     <command detect_errors="aggressive"><![CDATA[
         emapper.py
+        --no_annot  ## only search, i.e. no annotation
         @DB_TOKEN@
         @ORTHO_SEARCH_TOKEN@