Add test for library

galaxyproteomics · Nov 29, 2023 · f30e7c9 · f30e7c9
1 parent fa98edc
commit f30e7c9
Showing 1 changed file with 19 additions and 0 deletions.
diff --git a/tools/diann/diann.xml b/tools/diann/diann.xml
@@ -468,6 +468,25 @@
                 </assert_contents>
             </output>
         </test>
+        <!-- test for library -->
+        <test expect_num_outputs="1">
+            <section name="input">
+                <param name="f" value="small-peakpicking-cwt-allMS.mzML" />
+                <section name="spectral_lib_options">
+                    <param name="gen_spec_lib" value="True"/>
+                    <param name="lib" value="report-lib.tsv.speclib"/>
+                </section>
+                <section name="fasta_db_options">
+                    <param name="fasta" value="bsa.fasta,bsa2.fasta"/>
+                    <param name="fasta_search" value="True"/>
+                </section>
+            </section>
+            <output name="output_report" file="report.tsv">
+                <assert_contents>
+                    <has_text text="PG.Normalised"/>
+                </assert_contents>
+            </output>
+        </test>
         <!-- test for Bruker data -->
 <!--        <test expect_num_outputs="2">-->
 <!--            <section name="input">-->