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add biotools id to eggnog mapper and metaGeneAnnotator #733

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merged 1 commit into from
Nov 1, 2023
Merged

add biotools id to eggnog mapper and metaGeneAnnotator #733

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5 changes: 5 additions & 0 deletions tools/eggnog_mapper/eggnog_macros.xml
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Original file line number Diff line number Diff line change
Expand Up @@ -23,6 +23,11 @@
<requirement type="package" version="@TOOL_VERSION@">eggnog-mapper</requirement>
</requirements>
</xml>
<xml name="biotools">
<xrefs>
<xref type="bio.tools">eggnog-mapper-v2</xref>
</xrefs>
</xml>
<xml name="version_command">
<version_command>emapper.py --version</version_command>
</xml>
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1 change: 1 addition & 0 deletions tools/eggnog_mapper/eggnog_mapper/eggnog_mapper.xml
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Original file line number Diff line number Diff line change
Expand Up @@ -4,6 +4,7 @@
<import>eggnog_macros.xml</import>
</macros>
<expand macro="requirements"/>
<expand macro="biotools"/>
<expand macro="version_command"/>
<command detect_errors="aggressive"><![CDATA[
@MERGE_ANNOTATIONS@
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1 change: 1 addition & 0 deletions tools/eggnog_mapper/eggnog_mapper/eggnog_mapper_annotate.xml
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Original file line number Diff line number Diff line change
Expand Up @@ -4,6 +4,7 @@
<import>eggnog_macros.xml</import>
</macros>
<expand macro="requirements"/>
<expand macro="biotools"/>
<expand macro="version_command"/>
<command detect_errors="aggressive"><![CDATA[
@MERGE_ANNOTATIONS@
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1 change: 1 addition & 0 deletions tools/eggnog_mapper/eggnog_mapper/eggnog_mapper_search.xml
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Original file line number Diff line number Diff line change
Expand Up @@ -4,6 +4,7 @@
<import>eggnog_macros.xml</import>
</macros>
<expand macro="requirements"/>
<expand macro="biotools"/>
<expand macro="version_command"/>
<command detect_errors="aggressive"><![CDATA[
emapper.py
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5 changes: 5 additions & 0 deletions tools/metagene_annotator/metagene_annotator.xml
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Original file line number Diff line number Diff line change
Expand Up @@ -4,6 +4,11 @@
<requirement type="package">metagene_annotator</requirement>
<requirement type="package">python</requirement>
</requirements>
<xml name="biotools">
<xrefs>
<xref type="bio.tools">etageneannotator</xref>
</xrefs>
</xml>
<command detect_errors="exit_code"><![CDATA[
#set $output_list = str($output_formats).split(',')
touch mga_output
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