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Update samtools/fastq to add stub #603

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fellen31
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@fellen31 fellen31 commented Mar 5, 2025

Closes #602

PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the pipeline conventions in the contribution docs
  • Make sure your code lints (nf-core pipelines lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Check for unexpected warnings in debug mode (nextflow run . -profile debug,test,docker --outdir <OUTDIR>).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

@fellen31 fellen31 marked this pull request as ready for review March 5, 2025 15:08
@fellen31 fellen31 requested a review from a team as a code owner March 5, 2025 15:08
@fellen31 fellen31 merged commit 04ca81b into genomic-medicine-sweden:dev Mar 6, 2025
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@fellen31 fellen31 deleted the add-stub-to-samtools-fastq branch March 6, 2025 08:37
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Add stub to samtools/fastq
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