1 Release published by 1 person

• 0.5.1

  published Mar 10, 2025

8 Pull requests merged by 1 person

• Patch to dev

  #608 merged Mar 10, 2025

• Patch release 0.5.1

  #607 merged Mar 10, 2025

• Update joins with failOnMismatch:true & failOnDuplicate:true

  #604 merged Mar 10, 2025

• Module language server fixes

  #592 merged Mar 7, 2025

• Add stub to BUILD_INTERVALS

  #598 merged Mar 7, 2025

• Add stub to SPLIT_BED_CHUNKS

  #601 merged Mar 7, 2025

• Update samtools/fastq to add stub

  #603 merged Mar 6, 2025

• Back to dev

  #591 merged Mar 5, 2025

5 Pull requests opened by 3 people

• Subworkflow language server fixes

  #593 opened Mar 4, 2025

• add somalier ancestry

  #594 opened Mar 4, 2025

• Update hifiasm module to fix unstable assembly outputs

  #595 opened Mar 4, 2025

• Fix issue 293: bgzip & tabix blocks.tsv from whatshap/stats

  #606 opened Mar 10, 2025

• Add runtime estimates

  #609 opened Mar 10, 2025

4 Issues closed by 1 person

• Update joins with `failOnMismatch:true`

  #458 closed Mar 10, 2025

• Add stub to `BUILD_INTERVALS`

  #460 closed Mar 7, 2025

• Add stub to `SPLIT_BED_CHUNKS`

  #462 closed Mar 7, 2025

• Add stub to samtools/fastq

  #602 closed Mar 6, 2025

4 Issues opened by 1 person

• `ADD_MOST_SEVERE_CSQ` error when using Sniffles1 as SV-caller

  #605 opened Mar 6, 2025

• Samplesheet validation: Mother is not specified as female.

  #599 opened Mar 5, 2025

• Replace build_intervals with gawk nf-core module

  #597 opened Mar 4, 2025

• Samplesheet validation: parent does not exist in family

  #596 opened Mar 4, 2025

6 Unresolved conversations

Sometimes conversations happen on old items that aren’t yet closed. Here is a list of all the Issues and Pull Requests with unresolved conversations.

• [User Story] Update local modules to nf-core

  #20 commented on Mar 4, 2025 • 0 new comments

• Samplesheet validation: Restrict characters in samplesheet

  #504 commented on Mar 5, 2025 • 0 new comments

• Stranger not working for certain variants with multiple individuals per family

  #562 commented on Mar 5, 2025 • 0 new comments

• Unstable assembly outputs in tests

  #452 commented on Mar 5, 2025 • 0 new comments

• A "extra_vep_options" specifically for SV?

  #588 commented on Mar 5, 2025 • 0 new comments

• [User Story] Working `-stub` run

  #459 commented on Mar 6, 2025 • 0 new comments