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Update demo data commit hashes
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susannasiebert committed Jan 16, 2025
1 parent a3cc6d2 commit 9de8267
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions pvactools/tools/pvacview/server.R
Original file line number Diff line number Diff line change
Expand Up @@ -191,7 +191,7 @@ server <- shinyServer(function(input, output, session) {
## Class I demo aggregate report
#session$sendCustomMessage("unbind-DT", "mainTable")
withProgress(message = "Loading Demo Data", value = 0, {
load(url("https://github.com/griffithlab/pVACtools/raw/489a68cdd9e84e38b1bacc661aba15d78410282f/pvactools/tools/pvacview/data/HCC1395_demo_data.rda"))
load(url("https://github.com/griffithlab/pVACtools/raw/a3cc6d2b190a344d846438c1f0e5073e748dbd52/pvactools/tools/pvacview/data/HCC1395_demo_data.rda"))
incProgress(0.3)
#data <- getURL("https://raw.githubusercontent.com/griffithlab/pVACtools/c5a4f4c5b0bfa9c2832fc752e98dddea4c1c9eda/pvactools/tools/pvacview/data/H_NJ-HCC1395-HCC1395.Class_I.all_epitopes.aggregated.tsv")
#mainData <- read.table(text = data, sep = "\t", header = FALSE, stringsAsFactors = FALSE, check.names = FALSE)
Expand Down Expand Up @@ -255,7 +255,7 @@ server <- shinyServer(function(input, output, session) {
rownames(df$comments) <- df$mainTable$ID
incProgress(0.2)
## Class II additional demo aggregate report
add_data <- getURL("https://raw.githubusercontent.com/griffithlab/pVACtools/489a68cdd9e84e38b1bacc661aba15d78410282f/pvactools/tools/pvacview/data/H_NJ-HCC1395-HCC1395.Class_II.all_epitopes.aggregated.tsv")
add_data <- getURL("https://raw.githubusercontent.com/griffithlab/pVACtools/a3cc6d2b190a344d846438c1f0e5073e748dbd52/pvactools/tools/pvacview/data/H_NJ-HCC1395-HCC1395.Class_II.all_epitopes.aggregated.tsv")
addData <- read.table(text = add_data, sep = "\t", header = FALSE, stringsAsFactors = FALSE, check.names = FALSE)
colnames(addData) <- addData[1, ]
addData <- addData[-1, ]
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