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Sync HAFS submodules with their corresponding authoritative branches #86

Merged
merged 24 commits into from
Aug 13, 2021
Merged

Sync HAFS submodules with their corresponding authoritative branches #86

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e4d564c
*Update submodule hafs_forecast.fd synced with ufs-weather-model deve…
BinLiu-NOAA Jul 18, 2021
f10fa3a
Update hafs_forecast.fd submodule.
BinLiu-NOAA Jul 19, 2021
78d353b
Update submodules hafs_forecast.fd, hafs_gsi.fd, hafs_utils.fd.
BinLiu-NOAA Jul 25, 2021
40b1a95
Merge remote-tracking branch 'remotes/origin/feature/hafs_sync_202107…
BinLiu-NOAA Jul 25, 2021
fa43e9b
Update the default ccpp_suite name as FV3_HAFS_v0_gfdlmp_tedmf.
BinLiu-NOAA Jul 26, 2021
7fb430d
Update submodule hafs_forecast.fd and jobs/JHAFS_FORECAST to load the…
BinLiu-NOAA Jul 27, 2021
b72a3bd
Update submodule sorc/hafs_graphics.fd/hrd_gplot.
BinLiu-NOAA Jul 27, 2021
ad32d9f
Update submodule sorc/hafs_forecast.fd.
BinLiu-NOAA Jul 28, 2021
ecc2111
Update submodule hafs_forecast.fd.
BinLiu-NOAA Jul 31, 2021
02ad9ef
*Remove obsolete namelist options from input.nml (fdiag, fhmax, fhout…
BinLiu-NOAA Jul 31, 2021
3631794
Update submodule hafs_forecast.fd as well as the related input nameli…
BinLiu-NOAA Aug 1, 2021
d5bde6d
Update submodule hafs_forecast.fd. Update input*.nml.tmp, model_confi…
BinLiu-NOAA Aug 4, 2021
93b384b
Update submodule sorc/hafs_forecast.fd.
BinLiu-NOAA Aug 6, 2021
e56557f
Update submodule hafs_post.fd.
BinLiu-NOAA Aug 6, 2021
e0f5860
Use 30x40 PE layout for the nested domain of the global-nesting confi…
BinLiu-NOAA Aug 6, 2021
8d963e5
Update submodule hafs_gsi.fd.
BinLiu-NOAA Aug 6, 2021
ea42245
Update submodule sorc/hafs_graphics.fd/emc_graphics.
BinLiu-NOAA Aug 8, 2021
db97e38
Merge remote-tracking branch 'remotes/origin/develop' into feature/ha…
BinLiu-NOAA Aug 9, 2021
242d61b
Improvements to the script and job files for the hrdgraphics task.
ghassan-alaka Aug 11, 2021
d183591
Merge remote-tracking branch 'origin/hotfix-hrdgraphics' into feature…
BinLiu-NOAA Aug 11, 2021
86ba403
Update submodule sorc/hafs_graphics.fd/hrd_gplot.
BinLiu-NOAA Aug 11, 2021
2cbeb6e
Update submodule sorc/hafs_graphics.fd/emc_graphics.
BinLiu-NOAA Aug 11, 2021
7c8f07a
Fix CMake COMPILER in build_hycom_utils.sh
danrosen25 Aug 12, 2021
a349a24
Fix typo in build_hycom_utils.sh
danrosen25 Aug 13, 2021
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7 changes: 6 additions & 1 deletion jobs/JHAFS_FORECAST
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Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,12 @@ if [ "${RUN_ENVIR^^}" != NCO ]; then
module unload intelpython
fi
module use ${HOMEhafs}/sorc/hafs_forecast.fd/modulefiles
module load ufs_${machine}
module unload intelpython
if [ "${machine}" = "wcoss_cray" ] || [ "${machine}" = "wcoss_dell_p3" ]; then
module load ufs_${machine}
else
module load ufs_${machine}.intel
fi
module list
fi

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2 changes: 1 addition & 1 deletion jobs/JHAFS_HRDGRAPHICS
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Expand Up @@ -47,7 +47,7 @@ export STORMID=${STORMID:-00L}
export ENSDA=${ENSDA:-NO}

export INPdir=${INPdir:-${WORKhafs}/forecast}
export DATA=${WORKhafs}/hrd_graphics
export DATA=${WORKhafs}/hrdgraphics

export SENDCOM=${SENDCOM:-YES}
export SCRUBDATA=${SCRUBDATA:-YES}
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Empty file removed parm/forecast/globnest/data_table
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15 changes: 0 additions & 15 deletions parm/forecast/globnest/input.nml.tmp
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Original file line number Diff line number Diff line change
@@ -1,22 +1,8 @@
&amip_interp_nml
interp_oi_sst = .true.
use_ncep_sst = .true.
use_ncep_ice = .false.
no_anom_sst = .false.
data_set = 'reynolds_oi'
date_out_of_range = 'climo'
/

&atmos_model_nml
blocksize = _blocksize_
chksum_debug = .false.
dycore_only = .false.
fdiag = 3
avg_max_length = 3600.
fhmax = _fhmax_
fhout = 3
fhmaxhf = 0
fhouthf = 3
ccpp_suite = '_ccpp_suite_'
/

Expand Down Expand Up @@ -170,7 +156,6 @@
fhcyc = 24.
use_ufo = .true.
pre_rad = .false.
ncld = 5
imp_physics = 11
pdfcld = .false.
fhswr = _fhswr_
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15 changes: 0 additions & 15 deletions parm/forecast/globnest/input_nest02.nml.tmp
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Original file line number Diff line number Diff line change
@@ -1,22 +1,8 @@
&amip_interp_nml
interp_oi_sst = .true.
use_ncep_sst = .true.
use_ncep_ice = .false.
no_anom_sst = .false.
data_set = 'reynolds_oi'
date_out_of_range = 'climo'
/

&atmos_model_nml
blocksize = _blocksize_
chksum_debug = .false.
dycore_only = .false.
fdiag = 3
avg_max_length = 3600.
fhmax = _fhmax_
fhout = 3
fhmaxhf = 0
fhouthf = 3
ccpp_suite = '_ccpp_suite_'
/

Expand Down Expand Up @@ -159,7 +145,6 @@
fhcyc = 24.
use_ufo = .true.
pre_rad = .false.
ncld = 5
imp_physics = 11
pdfcld = .false.
fhswr = _fhswr_
Expand Down
13 changes: 1 addition & 12 deletions parm/forecast/globnest/model_configure.tmp
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Original file line number Diff line number Diff line change
@@ -1,23 +1,13 @@
print_esmf: .false.
total_member: 1
PE_MEMBER01: NTASKS
start_year: YR
start_month: MN
start_day: DY
start_hour: H_R
start_minute: 0
start_second: 0
nhours_fcst: NHRS
RUN_CONTINUE: .false.
ENS_SPS: .false.
dt_atmos: _dt_atmos_
cpl: _cpl_
calendar: 'julian'
memuse_verbose: .false.
atmos_nthreads: NTHRD
use_hyper_thread: .false.
ncores_per_node: NCNODE
debug_affinity: .true.
restart_interval: _restart_interval_
output_1st_tstep_rst: .false.

Expand All @@ -36,8 +26,6 @@ jchunk3d: -1
kchunk3d: -1
ideflate: 1
nbits: 0
write_nemsioflip: .false.
write_fsyncflag: .false.

app_domain: '_app_domain_'
output_grid: '_OUTPUT_GRID_'
Expand All @@ -54,3 +42,4 @@ nfhout: 3
nfhmax_hf: -1
nfhout_hf: 3
nsout: -1
output_fh: -1
Empty file removed parm/forecast/globnest_hwrf/data_table
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15 changes: 0 additions & 15 deletions parm/forecast/globnest_hwrf/input.nml.tmp
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Original file line number Diff line number Diff line change
@@ -1,22 +1,8 @@
&amip_interp_nml
interp_oi_sst = .true.
use_ncep_sst = .true.
use_ncep_ice = .false.
no_anom_sst = .false.
data_set = 'reynolds_oi'
date_out_of_range = 'climo'
/

&atmos_model_nml
blocksize = _blocksize_
chksum_debug = .false.
dycore_only = .false.
fdiag = 3
avg_max_length = 3600.
fhmax = _fhmax_
fhout = 3
fhmaxhf = 0
fhouthf = 3
ccpp_suite = '_ccpp_suite_'
/

Expand Down Expand Up @@ -169,7 +155,6 @@
fhcyc = 0.
use_ufo = .true.
pre_rad = .false.
ncld = 5
imp_physics = 15 ! F-A MP scheme
RHGRD = 0.975 ! F-A
spec_adv = .true. ! F-A
Expand Down
15 changes: 0 additions & 15 deletions parm/forecast/globnest_hwrf/input_nest02.nml.tmp
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Original file line number Diff line number Diff line change
@@ -1,22 +1,8 @@
&amip_interp_nml
interp_oi_sst = .true.
use_ncep_sst = .true.
use_ncep_ice = .false.
no_anom_sst = .false.
data_set = 'reynolds_oi'
date_out_of_range = 'climo'
/

&atmos_model_nml
blocksize = _blocksize_
chksum_debug = .false.
dycore_only = .false.
fdiag = 3
avg_max_length = 3600.
fhmax = _fhmax_
fhout = 3
fhmaxhf = 0
fhouthf = 3
ccpp_suite = '_ccpp_suite_'
/

Expand Down Expand Up @@ -159,7 +145,6 @@
fhcyc = 0.
use_ufo = .true.
pre_rad = .false.
ncld = 5
imp_physics = 15 ! F-A MP scheme
RHGRD = 1.0 ! F-A
spec_adv = .true. ! F-A
Expand Down
13 changes: 1 addition & 12 deletions parm/forecast/globnest_hwrf/model_configure.tmp
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Original file line number Diff line number Diff line change
@@ -1,23 +1,13 @@
print_esmf: .false.
total_member: 1
PE_MEMBER01: NTASKS
start_year: YR
start_month: MN
start_day: DY
start_hour: H_R
start_minute: 0
start_second: 0
nhours_fcst: NHRS
RUN_CONTINUE: .false.
ENS_SPS: .false.
dt_atmos: _dt_atmos_
cpl: _cpl_
calendar: 'julian'
memuse_verbose: .false.
atmos_nthreads: NTHRD
use_hyper_thread: .false.
ncores_per_node: NCNODE
debug_affinity: .true.
restart_interval: _restart_interval_
output_1st_tstep_rst: .false.

Expand All @@ -36,8 +26,6 @@ jchunk3d: -1
kchunk3d: -1
ideflate: 1
nbits: 0
write_nemsioflip: .false.
write_fsyncflag: .false.

app_domain: '_app_domain_'
output_grid: '_OUTPUT_GRID_'
Expand All @@ -54,3 +42,4 @@ nfhout: 3
nfhmax_hf: -1
nfhout_hf: 3
nsout: -1
output_fh: -1
Empty file removed parm/forecast/regional/data_table
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Empty file.
17 changes: 1 addition & 16 deletions parm/forecast/regional/input.nml.tmp
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Original file line number Diff line number Diff line change
@@ -1,24 +1,9 @@
&amip_interp_nml
interp_oi_sst = .true.
use_ncep_sst = .true.
use_ncep_ice = .false.
no_anom_sst = .false.
data_set = 'reynolds_oi'
date_out_of_range = 'climo'
/

&atmos_model_nml
blocksize = _blocksize_
chksum_debug = .false.
dycore_only = .false.
fdiag = 3
avg_max_length = 3600.
fhmax = _fhmax_
fhout = 3
fhmaxhf = 0
fhouthf = 3
ccpp_suite = '_ccpp_suite_'
merge_import = _merge_import_
/

&diag_manager_nml
Expand Down Expand Up @@ -164,7 +149,6 @@
fhcyc = 24.
use_ufo = .true.
pre_rad = .false.
ncld = 5
imp_physics = 11
pdfcld = .false.
fhswr = _fhswr_
Expand Down Expand Up @@ -223,6 +207,7 @@
cplice = .false.
cplwav = .false.
cplwav2atm = .false.
cpl_imp_mrg = _merge_import_
psautco = 0.0008, 0.0005
prautco = 0.00015, 0.00015
iau_delthrs = 6
Expand Down
13 changes: 1 addition & 12 deletions parm/forecast/regional/model_configure.tmp
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Original file line number Diff line number Diff line change
@@ -1,23 +1,13 @@
print_esmf: .false.
total_member: 1
PE_MEMBER01: NTASKS
start_year: YR
start_month: MN
start_day: DY
start_hour: H_R
start_minute: 0
start_second: 0
nhours_fcst: NHRS
RUN_CONTINUE: .false.
ENS_SPS: .false.
dt_atmos: _dt_atmos_
cpl: _cpl_
calendar: 'julian'
memuse_verbose: .false.
atmos_nthreads: NTHRD
use_hyper_thread: .false.
ncores_per_node: NCNODE
debug_affinity: .true.
restart_interval: _restart_interval_
output_1st_tstep_rst: .false.

Expand All @@ -36,8 +26,6 @@ jchunk3d: -1
kchunk3d: -1
ideflate: 1
nbits: 0
write_nemsioflip: .false.
write_fsyncflag: .false.

app_domain: '_app_domain_'
output_grid: '_OUTPUT_GRID_'
Expand All @@ -54,3 +42,4 @@ nfhout: 3
nfhmax_hf: -1
nfhout_hf: 3
nsout: -1
output_fh: -1
Empty file removed parm/forecast/regional_hwrf/data_table
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Empty file.
17 changes: 1 addition & 16 deletions parm/forecast/regional_hwrf/input.nml.tmp
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Original file line number Diff line number Diff line change
@@ -1,24 +1,9 @@
&amip_interp_nml
interp_oi_sst = .true.
use_ncep_sst = .true.
use_ncep_ice = .false.
no_anom_sst = .false.
data_set = 'reynolds_oi'
date_out_of_range = 'climo'
/

&atmos_model_nml
blocksize = _blocksize_
chksum_debug = .false.
dycore_only = .false.
fdiag = 3
avg_max_length = 3600.
fhmax = _fhmax_
fhout = 3
fhmaxhf = 0
fhouthf = 3
ccpp_suite = '_ccpp_suite_'
merge_import = _merge_import_
/

&diag_manager_nml
Expand Down Expand Up @@ -164,7 +149,6 @@
fhcyc = 0.
use_ufo = .true.
pre_rad = .false.
ncld = 5
imp_physics = 15 ! F-A MP scheme
RHGRD = 1.0 ! F-A
spec_adv = .true. ! F-A
Expand Down Expand Up @@ -228,6 +212,7 @@
cplice = .false.
cplwav = .false.
cplwav2atm = .false.
cpl_imp_mrg = _merge_import_
psautco = 0.0008, 0.0005
prautco = 0.00015, 0.00015
iau_delthrs = 6
Expand Down
13 changes: 1 addition & 12 deletions parm/forecast/regional_hwrf/model_configure.tmp
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Original file line number Diff line number Diff line change
@@ -1,23 +1,13 @@
print_esmf: .false.
total_member: 1
PE_MEMBER01: NTASKS
start_year: YR
start_month: MN
start_day: DY
start_hour: H_R
start_minute: 0
start_second: 0
nhours_fcst: NHRS
RUN_CONTINUE: .false.
ENS_SPS: .false.
dt_atmos: _dt_atmos_
cpl: _cpl_
calendar: 'julian'
memuse_verbose: .false.
atmos_nthreads: NTHRD
use_hyper_thread: .false.
ncores_per_node: NCNODE
debug_affinity: .true.
restart_interval: _restart_interval_
output_1st_tstep_rst: .false.

Expand All @@ -36,8 +26,6 @@ jchunk3d: -1
kchunk3d: -1
ideflate: 1
nbits: 0
write_nemsioflip: .false.
write_fsyncflag: .false.

app_domain: '_app_domain_'
output_grid: '_OUTPUT_GRID_'
Expand All @@ -54,3 +42,4 @@ nfhout: 3
nfhmax_hf: -1
nfhout_hf: 3
nsout: -1
output_fh: -1
6 changes: 3 additions & 3 deletions parm/hafs.conf
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Expand Up @@ -190,9 +190,9 @@ lnsigcutoff=1.3 ;; length for vertical localization

[forecast]
# ccpp suites
ccpp_suite_regional=HAFS_v0_gfdlmp_tedmf
ccpp_suite_glob=HAFS_v0_gfdlmp_tedmf
ccpp_suite_nest=HAFS_v0_gfdlmp_tedmf
ccpp_suite_regional=FV3_HAFS_v0_gfdlmp_tedmf
ccpp_suite_glob=FV3_HAFS_v0_gfdlmp_tedmf
ccpp_suite_nest=FV3_HAFS_v0_gfdlmp_tedmf

#radiation scheme calling time steps
fhswr=1800.
Expand Down
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