Skip to content

Commit

Permalink
Automated report
Browse files Browse the repository at this point in the history
  • Loading branch information
@anitacaron
anitacaron committed May 1, 2024
1 parent 455fbe9 commit ea655f9
Show file tree
Hide file tree
Showing 192 changed files with 80,973 additions and 16,759 deletions.
6 changes: 3 additions & 3 deletions NOTES.md
View file
Original file line number Diff line number Diff line change
Expand Up @@ -6,8 +6,8 @@ Release Notes

|Ontology|Version|
| :---: | :---: |
|UBERON|2024-03-22|
|CL|2024-02-13|
|UBERON|2024-03-22|
|PCL|2024-01-04|

### ASCT+b Tables
Expand All @@ -30,14 +30,14 @@ Release Notes
|Lymph_vasculature|v1.5|June 15, 2024|
|Main_Bronchus|v1.2|revise for April 1, 2024|
|Mammary_Gland|v1.0|revise for April 1, 2024|
|Muscular_System|v1.2|revise for April 1, 2024|
|Muscular_System|v1.2|April 29, 2024|
|Ovary|v1.3|revise for April 1, 2023|
|Pancreas|v1.4|revise for April 1, 2024|
|Palatine_Tonsil|V1.1|revise for April 1, 2024|
|Peripheral_nervous_system|v1.2|June 15, 2024|
|Placenta|v1.2|June 15, 2024|
|Prostate|v1.2|NA|
|Skeleton|v1.1|revise for April 1, 2024|
|Skeleton|v1.1|April 29, 2024|
|Skin|v1.4|Revise for April 1, 2024|
|Small_intestine|v1.2|revise for April 1, 2024|
|Spinal_Cord|v1.0|revise for April 1, 2024|
Expand Down
2 changes: 1 addition & 1 deletion docs/Anatomical_Systems/README.md
View file
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@

ASCT+B Validation Reports for Anatomical_Systems (2024-04-24)
ASCT+B Validation Reports for Anatomical_Systems (2024-05-01)
=============================================================

Table of contents
Expand Down
Binary file modified docs/Anatomical_Systems/assets/ccf_Anatomical_Systems_graph.pdf
View file
Binary file not shown.
2 changes: 1 addition & 1 deletion docs/Anatomical_Systems/graph.md
View file
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@

ASCT+B Validation Reports for Anatomical_Systems (2024-04-24)
ASCT+B Validation Reports for Anatomical_Systems (2024-05-01)
=============================================================

# ASCT+B as Graph
Expand Down
2 changes: 1 addition & 1 deletion docs/Blood/README.md
View file
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@

ASCT+B Validation Reports for Blood (2024-04-24)
ASCT+B Validation Reports for Blood (2024-05-01)
================================================

Table of contents
Expand Down
Binary file modified docs/Blood/assets/ccf_Blood_graph.pdf
View file
Binary file not shown.
2 changes: 1 addition & 1 deletion docs/Blood/graph.md
View file
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@

ASCT+B Validation Reports for Blood (2024-04-24)
ASCT+B Validation Reports for Blood (2024-05-01)
================================================

# ASCT+B as Graph
Expand Down
2 changes: 1 addition & 1 deletion docs/Blood_vasculature/README.md
View file
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@

ASCT+B Validation Reports for Blood_vasculature (2024-04-24)
ASCT+B Validation Reports for Blood_vasculature (2024-05-01)
============================================================

Table of contents
Expand Down
Binary file modified docs/Blood_vasculature/assets/ccf_Blood_vasculature_graph.pdf
View file
Binary file not shown.
2 changes: 1 addition & 1 deletion docs/Blood_vasculature/graph.md
View file
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@

ASCT+B Validation Reports for Blood_vasculature (2024-04-24)
ASCT+B Validation Reports for Blood_vasculature (2024-05-01)
============================================================

# ASCT+B as Graph
Expand Down
2 changes: 1 addition & 1 deletion docs/Bone-Marrow/README.md
View file
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@

ASCT+B Validation Reports for Bone-Marrow (2024-04-24)
ASCT+B Validation Reports for Bone-Marrow (2024-05-01)
======================================================

Table of contents
Expand Down
Binary file modified docs/Bone-Marrow/assets/ccf_Bone-Marrow_graph.pdf
View file
Binary file not shown.
2 changes: 1 addition & 1 deletion docs/Bone-Marrow/graph.md
View file
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@

ASCT+B Validation Reports for Bone-Marrow (2024-04-24)
ASCT+B Validation Reports for Bone-Marrow (2024-05-01)
======================================================

# ASCT+B as Graph
Expand Down
564 changes: 264 additions & 300 deletions docs/Brain/Brain_AS_CT_strict_log.tsv
View file

Large diffs are not rendered by default.

135 changes: 0 additions & 135 deletions docs/Brain/Brain_AS_has_part_CT_log.tsv
View file
Original file line number Diff line number Diff line change
@@ -1,136 +1 @@
s slabel user_slabel o olabel user_olabel row_number
CL:0000057 fibroblast fibroblast UBERON:0000955 brain brain 186
CL:0000057 fibroblast fibroblast UBERON:0000955 brain brain 189
CL:0000057 fibroblast fibroblast UBERON:0000955 brain brain 188
CL:0000057 fibroblast fibroblast UBERON:0000955 brain brain 187
CL:0000057 fibroblast fibroblast UBERON:0000955 brain brain 185
CL:0000057 fibroblast fibroblast UBERON:0000955 brain brain 184
CL:0000057 fibroblast fibroblast UBERON:0000955 brain brain 183
CL:0000057 fibroblast fibroblast UBERON:0000955 brain brain 182
CL:0000065 ependymal cell ependymal cell UBERON:0000955 brain brain 229
CL:0000065 ependymal cell ependymal cell UBERON:0000955 brain brain 223
CL:0000065 ependymal cell ependymal cell UBERON:0000955 brain brain 226
CL:0000065 ependymal cell ependymal cell UBERON:0000955 brain brain 227
CL:0000065 ependymal cell ependymal cell UBERON:0000955 brain brain 228
CL:0000065 ependymal cell ependymal cell UBERON:0000955 brain brain 230
CL:0000065 ependymal cell ependymal cell UBERON:0000955 brain brain 232
CL:0000127 astrocyte astrocyte UBERON:0000955 brain brain 221
CL:0000127 astrocyte astrocyte UBERON:0000955 brain brain 214
CL:0000127 astrocyte astrocyte UBERON:0000955 brain brain 217
CL:0000127 astrocyte astrocyte UBERON:0000955 brain brain 218
CL:0000127 astrocyte astrocyte UBERON:0000955 brain brain 219
CL:0000127 astrocyte astrocyte UBERON:0000955 brain brain 220
CL:0000128 oligodendrocyte oligodendrocyte UBERON:0000955 brain brain 205
CL:0000128 oligodendrocyte oligodendrocyte UBERON:0000955 brain brain 207
CL:0000128 oligodendrocyte oligodendrocyte UBERON:0000955 brain brain 198
CL:0000128 oligodendrocyte oligodendrocyte UBERON:0000955 brain brain 202
CL:0000128 oligodendrocyte oligodendrocyte UBERON:0000955 brain brain 203
CL:0000128 oligodendrocyte oligodendrocyte UBERON:0000955 brain brain 204
CL:0000128 oligodendrocyte oligodendrocyte UBERON:0019264 gray matter of forebrain gray matter of forebrain 206
CL:0000129 microglial cell microglia UBERON:0000955 brain brain 162
CL:0000129 microglial cell microglia UBERON:0000955 brain brain 163
CL:0000129 microglial cell microglia UBERON:0000955 brain brain 164
CL:0000129 microglial cell microglia UBERON:0000955 brain brain 165
CL:0000129 microglial cell microglia UBERON:0000955 brain brain 166
CL:0000129 microglial cell microglia UBERON:0000955 brain brain 167
CL:0000129 microglial cell microglia UBERON:0000955 brain brain 169
CL:0000129 microglial cell microglia UBERON:0000955 brain brain 170
CL:0000129 microglial cell microglia UBERON:0000955 brain brain 168
CL:0000402 CNS interneuron CNS interneuron UBERON:0000955 brain brain 431
CL:0000540 neuron neuron UBERON:0000955 brain brain 547
CL:0000540 neuron neuron UBERON:0000955 brain brain 542
CL:0000540 neuron neuron UBERON:0000955 brain brain 548
CL:0000540 neuron neuron UBERON:0001898 hypothalamus hypothalamus 549
CL:0000540 neuron neuron UBERON:0019264 gray matter of forebrain gray matter of forebrain 550
CL:0000540 neuron neuron UBERON:0000955 brain brain 545
CL:0000540 neuron neuron UBERON:0000955 brain brain 551
CL:0000540 neuron neuron UBERON:0001898 hypothalamus hypothalamus 543
CL:0000540 neuron neuron UBERON:0000988 pons pons 546
CL:0000540 neuron neuron UBERON:0000955 brain brain 541
CL:0000540 neuron neuron UBERON:0000955 brain brain 580
CL:0000540 neuron neuron UBERON:0000955 brain brain 539
CL:0000540 neuron neuron UBERON:0000988 pons pons 537
CL:0000540 neuron neuron UBERON:0000988 pons pons 552
CL:0000540 neuron neuron UBERON:0000955 brain brain 536
CL:0000540 neuron neuron UBERON:0019264 gray matter of forebrain gray matter of forebrain 535
CL:0000540 neuron neuron UBERON:0000955 brain brain 534
CL:0000540 neuron neuron UBERON:0019264 gray matter of forebrain gray matter of forebrain 533
CL:0000540 neuron neuron UBERON:0000955 brain brain 532
CL:0000540 neuron neuron UBERON:0000955 brain brain 531
CL:0000540 neuron neuron UBERON:0001891 midbrain midbrain (mesencephalon) 529
CL:0000540 neuron neuron UBERON:0000955 brain brain 540
CL:0000540 neuron neuron UBERON:0001891 midbrain midbrain (mesencephalon) 553
CL:0000540 neuron neuron UBERON:0000955 brain brain 561
CL:0000540 neuron neuron UBERON:0000955 brain brain 555
CL:0000540 neuron neuron UBERON:0019264 gray matter of forebrain gray matter of forebrain 579
CL:0000540 neuron neuron UBERON:0019264 gray matter of forebrain gray matter of forebrain 582
CL:0000540 neuron neuron UBERON:0019264 gray matter of forebrain gray matter of forebrain 578
CL:0000540 neuron neuron UBERON:0019264 gray matter of forebrain gray matter of forebrain 583
CL:0000540 neuron neuron UBERON:0000955 brain brain 586
CL:0000540 neuron neuron UBERON:0019264 gray matter of forebrain gray matter of forebrain 587
CL:0000540 neuron neuron UBERON:0001891 midbrain midbrain (mesencephalon) 528
CL:0000540 neuron neuron UBERON:0001898 hypothalamus hypothalamus 576
CL:0000540 neuron neuron UBERON:0001898 hypothalamus hypothalamus 575
CL:0000540 neuron neuron UBERON:0000955 brain brain 554
CL:0000540 neuron neuron UBERON:0019264 gray matter of forebrain gray matter of forebrain 574
CL:0000540 neuron neuron UBERON:0001898 hypothalamus hypothalamus 572
CL:0000540 neuron neuron UBERON:0001898 hypothalamus hypothalamus 571
CL:0000540 neuron neuron UBERON:0001898 hypothalamus hypothalamus 570
CL:0000540 neuron neuron UBERON:0001898 hypothalamus hypothalamus 569
CL:0000540 neuron neuron UBERON:0019264 gray matter of forebrain gray matter of forebrain 568
CL:0000540 neuron neuron UBERON:0019264 gray matter of forebrain gray matter of forebrain 567
CL:0000540 neuron neuron UBERON:0000955 brain brain 581
CL:0000540 neuron neuron UBERON:0000955 brain brain 560
CL:0000540 neuron neuron UBERON:0019264 gray matter of forebrain gray matter of forebrain 558
CL:0000540 neuron neuron UBERON:0000955 brain brain 573
CL:0000540 neuron neuron UBERON:0001891 midbrain midbrain (mesencephalon) 527
CL:0000540 neuron neuron UBERON:0000955 brain brain 503
CL:0000540 neuron neuron UBERON:0001891 midbrain midbrain (mesencephalon) 525
CL:0000540 neuron neuron UBERON:0000955 brain brain 495
CL:0000540 neuron neuron UBERON:0001891 midbrain midbrain (mesencephalon) 494
CL:0000540 neuron neuron UBERON:0000955 brain brain 526
CL:0000540 neuron neuron UBERON:0000988 pons pons 479
CL:0000540 neuron neuron UBERON:0000988 pons pons 478
CL:0000540 neuron neuron UBERON:0000988 pons pons 477
CL:0000540 neuron neuron UBERON:0000988 pons pons 476
CL:0000540 neuron neuron UBERON:0000988 pons pons 475
CL:0000540 neuron neuron UBERON:0000988 pons pons 473
CL:0000540 neuron neuron UBERON:0000955 brain brain 471
CL:0000540 neuron neuron UBERON:0001891 midbrain midbrain (mesencephalon) 455
CL:0000540 neuron neuron UBERON:0019264 gray matter of forebrain gray matter of forebrain 396
CL:0000540 neuron neuron UBERON:0000955 brain brain 395
CL:0000540 neuron neuron UBERON:0000955 brain brain 393
CL:0000540 neuron neuron UBERON:0000955 brain brain 336
CL:0000540 neuron neuron UBERON:0000955 brain brain 335
CL:0000540 neuron neuron UBERON:0002421 hippocampal formation hippocampal gyrus (formation) 334
CL:0000540 neuron neuron UBERON:0000988 pons pons 497
CL:0000540 neuron neuron UBERON:0000955 brain brain 498
CL:0000540 neuron neuron UBERON:0019264 gray matter of forebrain gray matter of forebrain 492
CL:0000540 neuron neuron UBERON:0002037 cerebellum cerebellum 500
CL:0000540 neuron neuron UBERON:0000955 brain brain 524
CL:0000540 neuron neuron UBERON:0000955 brain brain 523
CL:0000540 neuron neuron UBERON:0001891 midbrain midbrain (mesencephalon) 522
CL:0000540 neuron neuron UBERON:0019264 gray matter of forebrain gray matter of forebrain 521
CL:0000540 neuron neuron UBERON:0000988 pons pons 499
CL:0000540 neuron neuron UBERON:0000955 brain brain 519
CL:0000540 neuron neuron UBERON:0001891 midbrain midbrain (mesencephalon) 518
CL:0000540 neuron neuron UBERON:0001891 midbrain midbrain (mesencephalon) 517
CL:0000540 neuron neuron UBERON:0000955 brain brain 520
CL:0000540 neuron neuron UBERON:0001891 midbrain midbrain (mesencephalon) 515
CL:0000540 neuron neuron UBERON:0001891 midbrain midbrain (mesencephalon) 516
CL:0000540 neuron neuron UBERON:0001898 hypothalamus hypothalamus 589
CL:0000540 neuron neuron UBERON:0000955 brain brain 509
CL:0000540 neuron neuron UBERON:0001891 midbrain midbrain (mesencephalon) 510
CL:0000540 neuron neuron UBERON:0000955 brain brain 590
CL:0000540 neuron neuron UBERON:0000955 brain brain 512
CL:0000540 neuron neuron UBERON:0000955 brain brain 513
CL:0000540 neuron neuron UBERON:0000955 brain brain 514
CL:0000540 neuron neuron UBERON:0019264 gray matter of forebrain gray matter of forebrain 511
CL:0002453 oligodendrocyte precursor cell oligodendrocyte precursor cell UBERON:0000955 brain brain 194
CL:0002453 oligodendrocyte precursor cell oligodendrocyte precursor cell UBERON:0019264 gray matter of forebrain gray matter of forebrain 193
CL:0002453 oligodendrocyte precursor cell oligodendrocyte precursor cell UBERON:0000955 brain brain 192
CL:0002453 oligodendrocyte precursor cell oligodendrocyte precursor cell UBERON:0000955 brain brain 191
CL:0002453 oligodendrocyte precursor cell oligodendrocyte precursor cell UBERON:0000955 brain brain 190
CL:0012000 astrocyte of the forebrain astrocyte of the forebrain UBERON:0019264 gray matter of forebrain gray matter of forebrain 213
CL:0012000 astrocyte of the forebrain astrocyte of the forebrain UBERON:0019264 gray matter of forebrain gray matter of forebrain 212
CL:0012000 astrocyte of the forebrain astrocyte of the forebrain UBERON:0019264 gray matter of forebrain gray matter of forebrain 215
Loading

0 comments on commit ea655f9

Please sign in to comment.