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khanlab.github.io (khanlab.ca)

The website was built using Jekyll and Github pages. Organization of the website is structured such that each page's associated data has a corresponding folder (if necessary) under _data and _assets (for images). The exception to this are individual pages, which are under people/_posts. Page templates and common elements are stored in _layouts and _includes respectively.

A Jupyter notebook with a Github Actions cron job is utilized to update recent publications on a monthly basis.

The design of the website and use of Jekyll was inspired by nbclab.github.io.

All required packages are managed via Poetry (v1.2.x). Click on the package link to see setup instructions. This is only required to run the Jupyter notebook.

Updating website

See below for instructions on modifying each page. To modify or update a page, please make the necessary changes make a pull request to the repository!

Netlify has been enabled to preview pages from pull requests. After making a pull request, the Netlify bot will comment (after a short time) with a preview link! This link will look something like: https://deploy-preview-##--khanlab.github.io.netlify.app/ (where ## is associated with the pull request number).

To preview these changes on your local machine prior to publishing, follow the instructions on the following page.

join

This page contains information regarding recruitment. In the pages front matter, it includes 2 variables postdoc_recruit and grad_recruit - setting these to true/false will update the page with associated information.

For post-doc opportunities, updating the YAML file in join/postdoc.yml will add different available positions.

people

This page contains all present and past lab members. Each member's profile can be found in a markdown file under _posts. Within the front matter of each these files, contains information such as email, department, a link to a profile picture (a placeholder is used if not provided).

In order to facilitate sorting on the page, a year-month-date format has been utilized. The year and date are irrelevant, but the month is used to identify the member's role (e.g. Post-doc vs PhD). the mapping can be seen below:

01 - Staff
02 - Post-doc
03 - PhD Student
04 - Master's Student
05 - Undergraduate Student

A template has been drawn up and can be found in the people/_drafts directory.

By clicking on each user's profile picture, a window will pop up with information in detail, including a short blurb about the user, if provided.

If you include an image and it does not show up on the website, please check to see if an image has been uploaded or if the path is correct!

news

Similar to people, posts (found under news/_posts) are used to create articles. However, the date used here is important as it is used to sort and grab the latest articles.

software

Similar to people, posts (found under software/_posts) are used to create and update the table of developed software. As before, these are sorted by date and is not currently relevant for this page.

publications

A Jupyter notebook is used to grab all publications. Github actions is used to automate this process. This is updated monthly, and is currently set to display the 3 most recent articles. A full list of publications found is stored in a spreadsheet found in _data/index/publications/publications.csv.