Fix tests

loculus-project · Oct 7, 2024 · 6212f1a · 6212f1a
1 parent c187749
commit 6212f1a
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Showing 2 changed files with 3 additions and 3 deletions.
diff --git a/ena-submission/scripts/create_assembly.py b/ena-submission/scripts/create_assembly.py
@@ -135,7 +135,7 @@ def create_manifest_object(
 
     metadata = submission_table_entry["metadata"]
     unaligned_nucleotide_sequences = submission_table_entry["unaligned_nucleotide_sequences"]
-    organism_metadata = config.organisms[group_key["organism"]]["ingest"]
+    organism_metadata = config.organisms[group_key["organism"]]["enaDeposition"]
     chromosome_list_object = create_chromosome_list_object(unaligned_nucleotide_sequences, seq_key)
     chromosome_list_file = create_chromosome_list(list_object=chromosome_list_object, dir=dir)
     authors = (

diff --git a/ena-submission/scripts/ena_types.py b/ena-submission/scripts/ena_types.py
@@ -188,8 +188,8 @@ class AssemblyManifest:
     moleculetype: MoleculeType | None = None
     description: str | None = None
     run_ref: list[str] | None = None
-    address: str | None
-    authors: str | None
+    address: str | None = None
+    authors: str | None = None
 
 
 class ChromosomeType(Enum):