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Allow multiple snp_transcripts in plot_diplotype_clustering_advanced() #1397

Allow multiple snp_transcripts in plot_diplotype_clustering_advanced()

Allow multiple snp_transcripts in plot_diplotype_clustering_advanced() #1397

Workflow file for this run

name: notebooks
on:
push:
branches:
- master
pull_request:
branches:
- master
jobs:
notebooks:
strategy:
fail-fast: true
runs-on: ubuntu-latest
# Add "id-token" with the intended permissions.
permissions:
contents: 'read'
id-token: 'write'
steps:
- name: Checkout source
uses: actions/checkout@v4
- name: Setup python
uses: actions/setup-python@v5
with:
python-version: "3.12"
cache: "pip"
- name: Install package
run: pip install .[dev]
- id: 'auth'
name: 'Set up Google Cloud authentication'
uses: 'google-github-actions/auth@v2'
with:
credentials_json: '${{ secrets.GOOGLE_CREDENTIALS }}'
- name: 'Set up Google Cloud SDK'
uses: 'google-github-actions/setup-gcloud@v2'
with:
version: '>= 363.0.0'
- name: 'Check gcloud CLI'
run: 'gcloud info'
- name: Restore GCS cache
uses: actions/cache/restore@v3
with:
path: gcs_cache
key: gcs_cache_notebooks_20240922
- name: Run notebooks
run: jupyter nbconvert --execute notebooks/*.ipynb --inplace
- name: Save GCS cache
uses: actions/cache/save@v3
if: always()
with:
path: gcs_cache
key: gcs_cache_notebooks_20240922