Foldseek driver + Structure base Pangenome #2364
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As the Prostt5 weights are larger than 100mb. I decided to guide the user to download the Weights if it is necessary for them.
…nto foldseek-driver
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Another bug: Traceback (most recent call last): File "/home/msever/github/anvio/bin/anvi-pan-genome", line 165, in pan.process() File "/home/msever/github/anvio/anvio/panops.py", line 1379, in process self.store_gene_clusters(gene_clusters_dict) File "/home/msever/github/anvio/anvio/panops.py", line 953, in store_gene_clusters table_for_gc_psgc_associations.store() File "/home/msever/github/anvio/anvio/tables/geneclusters.py", line 106, in store self.delete_contents_of_table(t.pan_gc_psgc_associations_table_name, warning=False) File "/home/msever/github/anvio/anvio/tables/tableops.py", line 119, in delete_contents_of_table database._exec('''DELETE FROM %s''' % (table_name)) File "/home/msever/github/anvio/anvio/db.py", line 520, in _exec ret_val = self.cursor.execute(sql_query) sqlite3.OperationalError: no such table: gc_psgc_associations |
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@metehaansever, 3084b8f should fix the bug above. Please test :) |
Gets GC type data for inspection page.
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