Converting Esgpt caching to work for MEDS datasets#1

Merged

Oufattole merged 75 commits intomainfrom esgpt_caching

Jun 5, 2024

+2,902-42

Commits on May 25, 2024

added test case and initial testing and and code for shardingoutput tabular data
Oufattole
committed

Commits on May 26, 2024

added static feature pivoting
Oufattole
committed
added docstrings and a smiple test case checking the number of subjects is correct when producing static representations
Oufattole
committed

Commits on May 27, 2024

Refactor scripts into separate modules for improved clarity:
Oufattole
committed
fixed doctests and updated github workflow tests to use python 3.12
Oufattole
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Implement data processing for MEDS format to pivot tables into two indexed file types:
Oufattole
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Enhance data aggregation framework with dynamic window and aggregation handling
Oufattole
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Update src/MEDS_tabular_automl/generate_summarized_reps.py

mmcdermott
and
coderabbitai[bot]
authored
Update src/MEDS_tabular_automl/generate_summarized_reps.py

mmcdermott
and
coderabbitai[bot]
authored
Update src/MEDS_tabular_automl/generate_summarized_reps.py

mmcdermott
and
coderabbitai[bot]
authored
Added doctest and updated docstrings in identiy_columns.py. [WIP] addressing comments in other files
Oufattole
committed
Merge branch 'esgpt_caching' of github.com:mmcdermott/MEDS_Tabular_AutoML into esgpt_caching
Oufattole
committed

Commits on May 29, 2024

Commits on May 30, 2024

Commits on May 31, 2024

Commits on Jun 1, 2024

Commits on Jun 2, 2024