[ci skip] Merge PR 35412

Merge PR bioconda#35412, commits were: 
 * Merge branch 'bioconda:master' into scexecute_bioconda_recipe
 * Merge branch 'scexecute_bioconda_recipe' of github.com:HorvathLab/bioconda-recipes into scexecute_bioconda_recipe
 * Remove data subdirectory from conda package
 * Merge branch 'bioconda:master' into scexecute_bioconda_recipe
 * another try...
 * more logging?
 * hope so? or not?
 * hope so?
 * round in circles...
 * again...
 * another attempt...
 * What can I assume about the test command?
 * Why is this failing?
 * tweak test command, third attempt
 * tweak test command, attempt #2
 * tweak test command
 * add summary
 * Merge branch 'scexecute_bioconda_recipe' of github.com:HorvathLab/bioconda-recipes into scexecute_bioconda_recipe
 * Add licence
 * Merge branch 'bioconda:master' into scexecute_bioconda_recipe
 * Initial bioconda recipe for scexecute and screadcounts

recipes/scexecute/build.sh

@@ -0,0 +1,11 @@
+#!/bin/bash
+
+TARGET=share/$PKG_NAME-$PKG_VERSION-$PKG_BUILDNUM
+mkdir -p $PREFIX/$TARGET/bin
+mkdir -p $PREFIX/bin
+cp -r * $PREFIX/$TARGET
+rm -rf $PREFIX/$TARGET/data
+chmod -R a+rX $PREFIX/$TARGET
+chmod -R a+rx $PREFIX/$TARGET/bin/*
+cd $PREFIX/bin
+ln -s ../$TARGET/bin/* .

recipes/scexecute/meta.yaml

@@ -0,0 +1,35 @@
+{% set name = "scexecute" %}
+{% set version = "1.3.1" %}
+{% set md5 = "2be354173821a168e810fecc819bb440" %}
+
+package:
+  name: {{ name }}
+  version: {{ version }}
+
+source:
+  url: https://github.com/HorvathLab/NGS/releases/download/SCExecute-{{ version }}/SCExecute-{{ version }}.Python-3.7.tgz
+  md5: {{ md5 }}
+
+build:
+  noarch: generic
+  number: 0
+
+extra:
+  skip-lints:
+    - should_be_noarch_python
+
+requirements:
+  run:
+    - python >=3.7
+    - pysam
+    - wxpython
+    - samtools
+
+test:
+  commands:
+    - scExecute -h
+
+about:
+  home: https://github.com/HorvathLab/NGS/tree/master/SCExecute#readme
+  summary: "SCExecute generates cell-barcode specific BAM files from aligned, aggregate single-cell sequencing data, executing a user-provided command on each barcode-stratified BAM file."
+  license: MIT

recipes/screadcounts/build.sh

@@ -0,0 +1,11 @@
+#!/bin/bash
+
+TARGET=share/$PKG_NAME-$PKG_VERSION-$PKG_BUILDNUM
+mkdir -p $PREFIX/$TARGET/bin
+mkdir -p $PREFIX/bin
+cp -r * $PREFIX/$TARGET
+rm -rf $PREFIX/$TARGET/data
+chmod -R a+rX $PREFIX/$TARGET
+chmod -R a+rx $PREFIX/$TARGET/bin/
+cd $PREFIX/bin
+ln -s ../$TARGET/bin/* .

recipes/screadcounts/meta.yaml

@@ -0,0 +1,37 @@
+{% set name = "screadcounts" %}
+{% set version = "1.2.0" %}
+{% set md5 = "83e591cc26df4c14b5a1d0332cfe5349" %}
+
+package:
+  name: {{ name }}
+  version: {{ version }}
+
+source:
+  url: https://github.com/HorvathLab/NGS/releases/download/SCReadCounts-{{ version }}/SCReadCounts-{{ version }}.Python-3.7.tgz
+  md5: {{ md5 }}
+
+build:
+  noarch: generic
+  number: 0
+
+extra:
+  skip-lints:
+    - should_be_noarch_python
+
+requirements:
+  run:
+    - python >=3.7
+    - pysam
+    - wxpython
+    - samtools
+    - numpy
+    - scipy
+
+test:
+  commands:
+    - scReadCounts -h 
+
+about:
+  home: https://github.com/HorvathLab/NGS/tree/master/SCReadCounts#readme
+  summary: "SCReadCounts is a computational tool for a cell-level assessment of the read counts bearing a particular nucleotide at genomic positions of interest from single cell RNA sequencing (scRNA-seq) data."
+  license: MIT