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It would be nice if the scrnaseq pipeline had a similar/compatible genome preparation as the rnaseq pipeline.
I guess we all lack the time to port and implement it avoiding deduplication.
See:
https://github.com/nf-core/rnaseq/blob/master/subworkflows/local/prepare_genome/main.nf
The text was updated successfully, but these errors were encountered:
Duplicate of #313
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Yeah, we should have this here... Do you want to make a PR?
It's actually already implemented in #276. Will be fixed once this gets merged.
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Description of feature
It would be nice if the scrnaseq pipeline had a similar/compatible genome preparation as the rnaseq pipeline.
I guess we all lack the time to port and implement it avoiding deduplication.
See:
https://github.com/nf-core/rnaseq/blob/master/subworkflows/local/prepare_genome/main.nf
The text was updated successfully, but these errors were encountered: