Template developments

[anngvu]

PR with template developments.

• Related backend updates: https://www.synapse.org/#!Synapse:syn50913342/datasets/
  This is the in-development Dataset Management 2.0 based on dataset collections (instead of a table or entity view)
• Related portal util changes: Dataset features nfportalutils#74

[github-actions]

Test Suite Report

Template Generation

template	result	link
ClinicalAssayTemplate	😄	template link
EpigeneticsAssayTemplate	😄	template link
FlowCytometryTemplate	😄	template link
GenomicsAssayTemplate	😄	template link
ImagingAssayTemplate	😄	template link
LightScatteringAssayTemplate	😄	template link
MRIAssayTemplate	😄	template link
PharmacokineticsAssayTemplate	😄	template link
PlateBasedReporterAssayTemplate	😄	template link
ProcessedAlignedReadsTemplate	😄	template link
ProcessedExpressionTemplate	😄	template link
ProcessedVariantCallsTemplate	😄	template link
ProteomicsAssayTemplate	😄	template link
ProtocolTemplate	😄	template link
RNASeqTemplate	😄	template link
ScRNASeqTemplate	😄	template link
UpdateMilestoneReport	😄	template link
WESTemplate	😄	template link
WGSTemplate	😄	template link

Manifest Validation

manifest	result	expectation
GenomicsAssayTemplate_0.csv	😄	Lists can be blank if attr not required using ‘list like’ rule
GenomicsAssayTemplate_1.csv	😄	Single list val works by using ‘list like’ rule
GenomicsAssayTemplate_2.csv	😄	Mixing blanks and regular list values works
GenomicsAssayTemplate_3.csv	😄	Conditional validation for attributes is currently not supported
GenomicsAssayTemplate_4.csv	❌	A (double) value of 1.5 fails with rule int::inRange 1 2
GenomicsAssayTemplate_5.csv	❌	A value of 0 (outside range) fails with rule int::inRange 1 2

[allaway]

LGTM!