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Merge pull request #1044 from obophenotype/more_grouping_terms_for_ap…
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…pendix

Add 6 grouping terms for appendix
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@paolaroncaglia
paolaroncaglia authored Apr 22, 2021
2 parents cbbfd65 + c513759 commit eeaed08
Showing 1 changed file with 72 additions and 0 deletions.
72 changes: 72 additions & 0 deletions src/ontology/cl-edit.owl
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Original file line number Diff line number Diff line change
Expand Up @@ -1892,6 +1892,12 @@ Declaration(Class(obo:CL_0009025))
Declaration(Class(obo:CL_0009026))
Declaration(Class(obo:CL_0009027))
Declaration(Class(obo:CL_0009028))
Declaration(Class(obo:CL_0009029))
Declaration(Class(obo:CL_0009030))
Declaration(Class(obo:CL_0009031))
Declaration(Class(obo:CL_0009032))
Declaration(Class(obo:CL_0009033))
Declaration(Class(obo:CL_0009034))
Declaration(Class(obo:CL_0010000))
Declaration(Class(obo:CL_0010001))
Declaration(Class(obo:CL_0010002))
Expand Down Expand Up @@ -22341,6 +22347,72 @@ AnnotationAssertion(oboInOwl:inSubset obo:CL_0009028 <http://purl.obolibrary.org
AnnotationAssertion(rdfs:label obo:CL_0009028 "intestinal crypt stem cell of appendix")
EquivalentClasses(obo:CL_0009028 ObjectIntersectionOf(obo:CL_0002250 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0013486)))

# Class: obo:CL_0009029 (mesothelial cell of appendix)

AnnotationAssertion(Annotation(oboInOwl:hasDbXref "http://orcid.org/0000-0003-3440-1876") obo:IAO_0000115 obo:CL_0009029 "A mesothelial cell that is located in a vermiform appendix.")
AnnotationAssertion(oboInOwl:created_by obo:CL_0009029 <http://orcid.org/0000-0002-2825-0621>)
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0009029 "appendix mesothelial cell")
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0009029 "mesothelial cell of appendix vermiformis")
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0009029 "mesothelial cell of vermiform appendix")
AnnotationAssertion(oboInOwl:inSubset obo:CL_0009029 <http://purl.obolibrary.org/obo/pato#location_grouping>)
AnnotationAssertion(rdfs:label obo:CL_0009029 "mesothelial cell of appendix")
EquivalentClasses(obo:CL_0009029 ObjectIntersectionOf(obo:CL_0000077 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0001154)))

# Class: obo:CL_0009030 (enteroendocrine cell of appendix)

AnnotationAssertion(Annotation(oboInOwl:hasDbXref "http://orcid.org/0000-0003-3440-1876") obo:IAO_0000115 obo:CL_0009030 "An intestinal enteroendocrine cell that is located in a vermiform appendix.")
AnnotationAssertion(oboInOwl:created_by obo:CL_0009030 <http://orcid.org/0000-0002-2825-0621>)
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0009030 "appendix enteroendocrine cell")
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0009030 "enteroendocrine cell of appendix vermiformis")
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0009030 "enteroendocrine cell of vermiform appendix")
AnnotationAssertion(oboInOwl:inSubset obo:CL_0009030 <http://purl.obolibrary.org/obo/pato#location_grouping>)
AnnotationAssertion(rdfs:label obo:CL_0009030 "enteroendocrine cell of appendix")
EquivalentClasses(obo:CL_0009030 ObjectIntersectionOf(obo:CL_1001516 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0001154)))

# Class: obo:CL_0009031 (T cell of appendix)

AnnotationAssertion(Annotation(oboInOwl:hasDbXref "http://orcid.org/0000-0003-3440-1876") obo:IAO_0000115 obo:CL_0009031 "A T cell that is located in a vermiform appendix.")
AnnotationAssertion(oboInOwl:created_by obo:CL_0009031 <http://orcid.org/0000-0002-2825-0621>)
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0009031 "T cell of appendix vermiformis")
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0009031 "T cell of vermiform appendix")
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0009031 "appendix T cell")
AnnotationAssertion(oboInOwl:inSubset obo:CL_0009031 <http://purl.obolibrary.org/obo/pato#location_grouping>)
AnnotationAssertion(rdfs:label obo:CL_0009031 "T cell of appendix")
EquivalentClasses(obo:CL_0009031 ObjectIntersectionOf(obo:CL_0000084 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0001154)))

# Class: obo:CL_0009032 (B cell of appendix)

AnnotationAssertion(Annotation(oboInOwl:hasDbXref "http://orcid.org/0000-0003-3440-1876") obo:IAO_0000115 obo:CL_0009032 "A B cell that is located in a vermiform appendix.")
AnnotationAssertion(oboInOwl:created_by obo:CL_0009032 <http://orcid.org/0000-0002-2825-0621>)
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0009032 "B cell of appendix vermiformis")
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0009032 "B cell of vermiform appendix")
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0009032 "appendix B cell")
AnnotationAssertion(oboInOwl:inSubset obo:CL_0009032 <http://purl.obolibrary.org/obo/pato#location_grouping>)
AnnotationAssertion(rdfs:label obo:CL_0009032 "B cell of appendix")
EquivalentClasses(obo:CL_0009032 ObjectIntersectionOf(obo:CL_0000236 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0001154)))

# Class: obo:CL_0009033 (plasma cell of appendix)

AnnotationAssertion(Annotation(oboInOwl:hasDbXref "http://orcid.org/0000-0003-3440-1876") obo:IAO_0000115 obo:CL_0009033 "A plasma cell that is located in a vermiform appendix.")
AnnotationAssertion(oboInOwl:created_by obo:CL_0009033 <http://orcid.org/0000-0002-2825-0621>)
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0009033 "appendix plasma cell")
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0009033 "plasma cell of appendix vermiformis")
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0009033 "plasma cell of vermiform appendix")
AnnotationAssertion(oboInOwl:inSubset obo:CL_0009033 <http://purl.obolibrary.org/obo/pato#location_grouping>)
AnnotationAssertion(rdfs:label obo:CL_0009033 "plasma cell of appendix")
EquivalentClasses(obo:CL_0009033 ObjectIntersectionOf(obo:CL_0000786 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0001154)))

# Class: obo:CL_0009034 (dendritic cell of appendix)

AnnotationAssertion(Annotation(oboInOwl:hasDbXref "http://orcid.org/0000-0003-3440-1876") obo:IAO_0000115 obo:CL_0009034 "A dendritic cell that is located in a vermiform appendix.")
AnnotationAssertion(oboInOwl:created_by obo:CL_0009034 <http://orcid.org/0000-0002-2825-0621>)
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0009034 "appendix dendritic cell")
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0009034 "dendritic cell of appendix vermiformis")
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0009034 "dendritic cell of vermiform appendix")
AnnotationAssertion(oboInOwl:inSubset obo:CL_0009034 <http://purl.obolibrary.org/obo/pato#location_grouping>)
AnnotationAssertion(rdfs:label obo:CL_0009034 "dendritic cell of appendix")
EquivalentClasses(obo:CL_0009034 ObjectIntersectionOf(obo:CL_0000451 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0001154)))

# Class: obo:CL_0010000 (keratinized cell of hair follicle)

AnnotationAssertion(Annotation(oboInOwl:hasDbXref <https://github.com/obophenotype/cell-ontology/issues/417>) obo:IAO_0000115 obo:CL_0010000 "A hair follicle matrix region cell which synthesizes keratin and undergoes a characteristic change as it moves upward from the hair bulb to become the hair medulla cortex and hair root sheath.")
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