Geppetto Release 0.3.5

Install Instructions | Documentation | Live deployment

New in release 0.3.5-alpha:

• Removing vendor libraries, transition to npm for frontend dependencies management (@adrianq, @tarelli, @gidili)
• Removing Bower and Grunt, using WebPack to bundle Geppetto (@adrianq, @tarelli)
• Camera rotates around selected object (@tarelli)
• Geppetto Jupyter now available through PIP (@adrianq)
• Expose calcium state variables in NeuroML models (@mattearnshaw)
• Improve synchronization between Python and Javascript in Jupyter extension (@adrianq)

Database and user accounts support requires a Geppetto deployment inclusive of org.geppetto.persistence and MySQL database installed, see instructions to set it up.
Running of NEURON simulations requires a deployment with org.geppetto.simulator.external and NEURON installed in the server.

Part of the work in this release was supported by:

• NeuroSim Lab
• Open Source Brain and Wellcome Trust
• MetaCell