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    73 repositories

    • distributions

      Public
      Makefile
      •
      BSD 3-Clause "New" or "Revised" License
      •5•1•2•3•Updated Nov 10, 2024Nov 10, 2024

    • library

      Public
      A website for sharing QIIME 2 Plugins
      Svelte
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•3•0•Updated Nov 10, 2024Nov 10, 2024

    • q2-fmt

      Public
      q2-fmt is an all-in-one suite for assessing engraftment extent following Fecal Microbiota Transplants!
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •11•4•7•2•Updated Nov 8, 2024Nov 8, 2024

    • q2-vizard

      Public
      The first choice of wizard lizards for interactive, generalized microbiome data visualization!
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •9•0•7•3•Updated Nov 7, 2024Nov 7, 2024

    • qiime2.org

      Public
      qiime2.org source
      JavaScript
      •2•0•0•0•Updated Nov 7, 2024Nov 7, 2024

    • action-library-packaging

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •5•0•0•1•Updated Nov 5, 2024Nov 5, 2024

    • q2view

      Public
      A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations
      TypeScript
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•3•0•Updated Nov 4, 2024Nov 4, 2024

    • docs

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •58•21•31•1•Updated Oct 30, 2024Oct 30, 2024

    • data302

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •10•0•1•0•Updated Oct 30, 2024Oct 30, 2024

    • galaxy-tools

      Public
      Official QIIME 2 tools for Galaxy
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •5•1•8•3•Updated Oct 30, 2024Oct 30, 2024

    • qiime2

      Public
      Official repository for the QIIME 2 framework.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •240•473•64•7•Updated Oct 25, 2024Oct 25, 2024

    • q2cli

      Public
      Command line interface for QIIME 2
      hacktoberfestq2interface
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •24•19•13•0•Updated Oct 25, 2024Oct 25, 2024

    • library-plugins

      Public
      Stores a list of the repos that are included in the QIIME 2 library
      BSD 3-Clause "New" or "Revised" License
      •2•0•0•0•Updated Oct 24, 2024Oct 24, 2024

    • q2view-gallery

      Public
      HTML
      •
      BSD 3-Clause "New" or "Revised" License
      •3•0•0•0•Updated Oct 24, 2024Oct 24, 2024

    • q2-stats

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •7•1•1•0•Updated Oct 24, 2024Oct 24, 2024

    • q2-composition

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •28•5•7•0•Updated Oct 23, 2024Oct 23, 2024

    • q2-cutadapt

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •18•3•4•0•Updated Oct 23, 2024Oct 23, 2024

    • q2galaxy

      Public
      Generate Galaxy tool descriptions automatically from QIIME 2 actions.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •18•19•8•0•Updated Oct 23, 2024Oct 23, 2024

    • q2-vsearch

      Public
      vsearch plugin for QIIME 2
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •20•6•10•1•Updated Oct 23, 2024Oct 23, 2024

    • q2-types

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •41•17•26•1•Updated Oct 23, 2024Oct 23, 2024

    • q2-taxa

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •29•3•43•0•Updated Oct 23, 2024Oct 23, 2024

    • q2-sample-classifier

      Public
      QIIME 2 plugin for machine learning prediction of sample data.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •36•6•15•0•Updated Oct 23, 2024Oct 23, 2024

    • q2-quality-filter

      Public
      Quality filtering for QIIME2
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •16•1•4•0•Updated Oct 23, 2024Oct 23, 2024

    • q2-quality-control

      Public
      A QIIME 2 plugin for quality control of sequence and feature data
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •17•4•8•0•Updated Oct 23, 2024Oct 23, 2024

    • q2-phylogeny

      Public
      Phylogenetic reconstruction, and operations on phylogenetic trees.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •19•4•2•0•Updated Oct 23, 2024Oct 23, 2024

    • q2-mystery-stew

      Public
      This plugin exists to define integration tests between interfaces and the framework.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •6•0•0•0•Updated Oct 23, 2024Oct 23, 2024

    • q2-metadata

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •17•3•6•0•Updated Oct 23, 2024Oct 23, 2024

    • q2-longitudinal

      Public
      QIIME 2 plugin for paired sample comparisons
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •18•9•30•1•Updated Oct 23, 2024Oct 23, 2024

    • q2-fragment-insertion

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •17•13•10•0•Updated Oct 23, 2024Oct 23, 2024

    • q2-feature-table

      Public
      QIIME 2 plugin supporting operations on feature tables.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •37•2•23•3•Updated Oct 23, 2024Oct 23, 2024