no longer allow implicit Optional in mypy #1936
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| name: CI Upstream | |
| on: | |
| push: | |
| pull_request: | |
| schedule: | |
| - cron: "0 23 * * 0" # Sun 23:00 UTC | |
| workflow_dispatch: # allows you to trigger the workflow run manually | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| detect-ci-trigger: | |
| name: detect upstream-dev ci trigger | |
| runs-on: ubuntu-latest | |
| if: github.event_name == 'push' || github.event_name == 'pull_request' | |
| outputs: | |
| triggered: ${{ steps.detect-trigger.outputs.trigger-found }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 2 | |
| - uses: xarray-contrib/[email protected] | |
| id: detect-trigger | |
| with: | |
| keyword: "[test-upstream]" | |
| upstream-dev: | |
| name: upstream-dev | |
| runs-on: ubuntu-latest | |
| needs: detect-ci-trigger | |
| if: | | |
| always() | |
| && github.repository == 'pangeo-data/climpred' | |
| && ( | |
| (github.event_name == 'schedule' || github.event_name == 'workflow_dispatch') | |
| || needs.detect-ci-trigger.outputs.triggered == 'true' | |
| ) | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.10"] | |
| outputs: | |
| artifacts_availability: ${{ steps.status.outputs.ARTIFACTS_AVAILABLE }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 # Fetch all history for all branches and tags. | |
| - name: Set up conda (micromamba) | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: ci/requirements/climpred-dev.yml | |
| environment-name: climpred-dev | |
| cache-environment: true | |
| create-args: >- | |
| python=${{ matrix.python-version }} | |
| pytest-reportlog | |
| conda | |
| - name: Set up conda environment | |
| run: | | |
| bash ci/install-upstream-wheels.sh | |
| - name: Install climpred (no deps) | |
| run: | | |
| python -m pip install --no-deps -e . | |
| - name: Conda info | |
| run: conda info -a | |
| - name: Conda list | |
| run: conda list | |
| - name: import climpred | |
| run: | | |
| python -c 'import climpred; climpred.show_versions()' | |
| - name: Run Tests | |
| if: success() | |
| id: status | |
| run: | | |
| python -m pytest --timeout=60 -rf \ | |
| --report-log output-${{ matrix.python-version }}-log.jsonl \ | |
| || ( | |
| echo '::set-output name=ARTIFACTS_AVAILABLE::true' && false | |
| ) | |
| - name: Upload artifacts | |
| if: | | |
| failure() | |
| && github.event_name == 'schedule' | |
| && steps.status.outcome == 'failure' | |
| && github.repository == 'pangeo-data/climpred' | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: output-${{ matrix.python-version }}-log.jsonl | |
| path: output-${{ matrix.python-version }}-log.jsonl | |
| retention-days: 5 | |
| report: | |
| name: report | |
| needs: upstream-dev | |
| if: | | |
| always() | |
| && github.event_name == 'schedule' | |
| && github.repository == 'pangeo-data/climpred' | |
| && needs.upstream-dev.outputs.artifacts_availability == 'true' | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.x" | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| path: /tmp/workspace/logs | |
| - name: Move all log files into a single directory | |
| run: | | |
| rsync -a /tmp/workspace/logs/output-*/ ./logs | |
| ls -R ./logs | |
| - name: Parse logs | |
| run: | | |
| shopt -s globstar | |
| wget https://raw.githubusercontent.com/pydata/xarray/main/.github/workflows/parse_logs.py | |
| python -m pip install pytest | |
| ls logs/**/*-log* | |
| ls | |
| python parse_logs.py logs/**/*-log* | |
| cat pytest-logs.txt | |
| - name: Report failures | |
| uses: actions/github-script@v7 | |
| with: | |
| github-token: ${{ secrets.GITHUB_TOKEN }} | |
| script: | | |
| const fs = require('fs'); | |
| const pytest_logs = fs.readFileSync('pytest-logs.txt', 'utf8'); | |
| const title = "⚠️ Nightly upstream-dev CI failed ⚠️" | |
| const workflow_url = `https://github.com/${process.env.GITHUB_REPOSITORY}/actions/runs/${process.env.GITHUB_RUN_ID}` | |
| const issue_body = `[Workflow Run URL](${workflow_url})\n${pytest_logs}` | |
| // Run GraphQL query against GitHub API to find the most recent open issue used for reporting failures | |
| const query = `query($owner:String!, $name:String!, $creator:String!, $label:String!){ | |
| repository(owner: $owner, name: $name) { | |
| issues(first: 1, states: OPEN, filterBy: {createdBy: $creator, labels: [$label]}, orderBy: {field: CREATED_AT, direction: DESC}) { | |
| edges { | |
| node { | |
| body | |
| id | |
| number | |
| } | |
| } | |
| } | |
| } | |
| }`; | |
| const variables = { | |
| owner: context.repo.owner, | |
| name: context.repo.repo, | |
| label: 'CI', | |
| creator: "github-actions[bot]" | |
| } | |
| const result = await github.graphql(query, variables) | |
| // If no issue is open, create a new issue, | |
| // else update the body of the existing issue. | |
| if (result.repository.issues.edges.length === 0) { | |
| github.rest.issues.create({ | |
| owner: variables.owner, | |
| repo: variables.name, | |
| body: issue_body, | |
| title: title, | |
| labels: [variables.label] | |
| }) | |
| } else { | |
| github.rest.issues.update({ | |
| owner: variables.owner, | |
| repo: variables.name, | |
| issue_number: result.repository.issues.edges[0].node.number, | |
| body: issue_body | |
| }) | |
| } |