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30 Open 333 Closed
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Issues list

looper report happily makes an empty report bug
#537 opened Nov 12, 2024 by nsheff
@donaldcampbelljr
looper table appears to re-create the item once per sample, and makes empty table bug
#536 opened Nov 12, 2024 by nsheff
@donaldcampbelljr
3
looper report makes files with spaces in names bug
#535 opened Nov 12, 2024 by nsheff
@donaldcampbelljr
looper report file location parameter missing
#534 opened Nov 12, 2024 by nsheff
@donaldcampbelljr
1
looper report messaging
#533 opened Oct 17, 2024 by nsheff
@donaldcampbelljr
portable report zip missing extension docs
#532 opened Oct 17, 2024 by nsheff
@donaldcampbelljr
Rerun documentation docs
#531 opened Oct 10, 2024 by nsheff
Reduce verbosity of refgenie tag plugin? likely-solved
#529 opened Oct 9, 2024 by nsheff
2
Misleading error message if pipeline_interface path does not exist
#528 opened Oct 9, 2024 by nsheff
divvy dev suggestions enhancement
#527 opened Oct 9, 2024 by nsheff
@donaldcampbelljr
sizing keyword is not working correctly bug
#524 opened Sep 19, 2024 by nsheff
1
looper is not validating inputs correctly bug
#523 opened Sep 19, 2024 by nsheff
3
looper report runs pipestat summarize multiple times bug
#522 opened Sep 10, 2024 by donaldcampbelljr
divvy init gives error when initializing new default likely-solved
#520 opened Aug 27, 2024 by donaldcampbelljr
looper config should allow for pipestat pephub path. likely-solved
#519 opened Aug 26, 2024 by donaldcampbelljr
1
looper cli is not taking priority if cli modifiers are used in looper config likely-solved
#518 opened Aug 22, 2024 by donaldcampbelljr v2.0.0
3
Error: looper requires JWT for retrieving public PEP from PEPhub bug
#516 opened Aug 22, 2024 by nsheff v2.0.0
@khoroshevskyi
5
Improve error message for bad looper config likely-solved messaging
#515 opened Aug 22, 2024 by nsheff v2.0.0
@donaldcampbelljr
6
Make suggested changes to looper init likely-solved
#514 opened Aug 20, 2024 by donaldcampbelljr
4 tasks done
v2.0.0
4
divvy list error bug likely-solved
#512 opened Aug 19, 2024 by nsheff v2.0.0
1
Remove printed dict at looper finish likely-solved
#511 opened Aug 19, 2024 by donaldcampbelljr v2.0.0
1
how do to parallel-process files with looper locally -- lump them together, this will group several commands in one like:
#498 opened Jun 5, 2024 by donaldcampbelljr
1
For Looper 2.0, we will consolidate sample and project level pipeline interfaces under a single interface. likely-solved
#493 opened May 24, 2024 by donaldcampbelljr v2.0.0
Speeding up looper CLI use enhancement
#476 opened Mar 12, 2024 by nsheff v2.1.0
@donaldcampbelljr
4
Making looper approachable for a new project docs likely-solved priority-high
#466 opened Feb 16, 2024 by nsheff
1 of 7 tasks
v2.0.0
6
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