ADD: detect donor indicators pipeline #86
ci-q2-fmt.yml
on: pull_request
lint
7s
Matrix: ci / install-env-and-test
Annotations
3 errors and 8 warnings
ci / install-env-and-test (macos-latest)
The process '/Users/runner/miniconda3/condabin/conda' failed with exit code 1
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ci / install-env-and-test (ubuntu-latest)
The job was canceled because "macos-latest" failed.
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ci / install-env-and-test (ubuntu-latest)
The operation was canceled.
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ci / install-env-and-test (macos-latest)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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ci / install-env-and-test (macos-latest)
/Users/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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ci / install-env-and-test (macos-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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ci / install-env-and-test (macos-latest)
/Users/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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ci / install-env-and-test (macos-latest)
PackagesNotFoundError: The following packages are not available from current channels:
- qiime2-amplicon
Current channels:
- https://packages.qiime2.org/qiime2/2024.10/amplicon/passed
- https://conda.anaconda.org/conda-forge
- https://conda.anaconda.org/bioconda
- https://repo.anaconda.com/pkgs/main
- https://repo.anaconda.com/pkgs/r
To search for alternate channels that may provide the conda package you're
looking for, navigate to
https://anaconda.org
and use the search bar at the top of the page.
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ci / install-env-and-test (ubuntu-latest)
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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ci / install-env-and-test (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
|
ci / install-env-and-test (ubuntu-latest)
/home/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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