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29 Open 60 Closed
29 Open 60 Closed
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Issues list

visium_hd() Error
#217 opened Oct 3, 2024 by Demond-dev
1
Bug in v0.1.5 visium_hd reader
#216 opened Oct 3, 2024 by t-a-m-i
2
cosmx - ValueError: Affine matrix must be homogeneous.
#213 opened Oct 2, 2024 by jamesboot
3
Handling empty prefix
#212 opened Sep 27, 2024 by hiraksarkar
4
Merscope - not loading vpt output
#208 opened Sep 18, 2024 by MathieuBo
1
Export the real global coordinates of cells (Xenium)
#205 opened Sep 9, 2024 by nkuweili
1
Confusion on constructing SpatialData object from the ground up
#203 opened Sep 6, 2024 by MiTPenguin
2
3D visualize
#201 opened Aug 18, 2024 by Yifan-debug
1
Xenium: use physical units instead of pixel units as references xenium
#198 opened Aug 14, 2024 by wangjiawen2013
6
Segmented CODEX data in QuPath csv to squidpy
#197 opened Aug 13, 2024 by andreevg04
1
Can't read re-segmented Xenium data xenium
#195 opened Aug 11, 2024 by liz-is
4
Xenium cells with 2 nuclei xenium
#188 opened Aug 2, 2024 by LucaMarconato
Update link to Xenium file format. xenium
#181 opened Jul 31, 2024 by LucaMarconato
Verify compatibility with Xenium Onboard Analysis 3.0 xenium
#180 opened Jul 31, 2024 by LucaMarconato
2 tasks
Inquiry about Visium HD
#177 opened Jul 25, 2024 by aalia09123
2
Alignment image with xenium
#168 opened Jul 2, 2024 by Yifan-debug
1
24
bounding_box_query does not work on cellpose result stored in spatialdata
#166 opened Jun 27, 2024 by mamyAndrianteranagna
10
Stereoseq expected directory structure
#161 opened Jun 18, 2024 by aadimator
5
How to represent rounds and channels in ISS data
#159 opened Jun 17, 2024 by tischi
11
Support for MACSima data
#155 opened Jun 11, 2024 by berombau
7 of 13 tasks
Wrong file loaded when building new SpatialData
#147 opened May 17, 2024 by dawe
2
Cannot load VisiumHD data without image
#140 opened Apr 27, 2024 by pakiessling
store probe set for image-based transcriptomics in spatialdata
#138 opened Apr 23, 2024 by giovp
3
Wrong Visium radii?
#124 opened Mar 18, 2024 by LucaMarconato
1
How to load Merscope data missing cell_boundaries.parquet file?
#71 opened Jul 19, 2023 by ghar1821
6
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