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| Original file line number | Diff line number | Diff line change |
|---|---|---|
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@@ -5,9 +5,6 @@ | |
| name: Latest Libraries | ||
|
|
||
| on: | ||
| # Will always run on the default branch | ||
| schedule: | ||
| - cron: "0 4 * * SUN" | ||
| # Enables a manual trigger, may run on any branch | ||
| workflow_dispatch: | ||
|
|
||
|
|
@@ -33,73 +30,44 @@ jobs: | |
| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| compiler: [11, 12, 13] | ||
| compiler: ["clang-18", "clang-17", "gcc-14", "gcc-13", "gcc-12", "gcc-11", "intel"] | ||
| build: [unit, snippet, performance, header] | ||
| include: | ||
| - compiler: 12 | ||
| build: unit | ||
| cxx_flags: "-Wno-restrict" # Bogus errors in gtest that won't be fixed upstream | ||
|
|
||
| - compiler: "intel" | ||
| cxx_flags: "-fp-model=strict -Wno-overriding-option" | ||
| container: | ||
| image: ghcr.io/seqan/${{ matrix.compiler }} | ||
| volumes: | ||
| - /home/runner:/home/runner | ||
| steps: | ||
| - name: Checkout SeqAn3 | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| path: seqan3 | ||
| submodules: true | ||
|
|
||
| - name: Update all submodules | ||
| run: | | ||
| cd seqan3 | ||
| git submodule status | ||
| git submodule update --recursive --remote | ||
| git submodule status | ||
| - name: Update googletest | ||
| run: | | ||
| grep 'SEQAN3_GTEST_TAG ".*"' seqan3/test/cmake/seqan3_require_test.cmake | ||
| sed -i 's/SEQAN3_GTEST_TAG ".*"/SEQAN3_GTEST_TAG "main"/' seqan3/test/cmake/seqan3_require_test.cmake | ||
| grep 'SEQAN3_GTEST_TAG ".*"' seqan3/test/cmake/seqan3_require_test.cmake | ||
|
|
||
| - name: Update googlebenchmark | ||
| - name: Update dependencies | ||
| run: | | ||
| grep 'SEQAN3_BENCHMARK_TAG ".*"' seqan3/test/cmake/seqan3_require_benchmark.cmake | ||
| sed -i 's/SEQAN3_BENCHMARK_TAG ".*"/SEQAN3_BENCHMARK_TAG "main"/' seqan3/test/cmake/seqan3_require_benchmark.cmake | ||
| grep 'SEQAN3_BENCHMARK_TAG ".*"' seqan3/test/cmake/seqan3_require_benchmark.cmake | ||
| - name: Checkout SeqAn2 | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| repository: seqan/seqan | ||
| path: seqan3/submodules/seqan | ||
|
|
||
| - name: Setup compiler | ||
| uses: seqan/actions/setup-compiler@main | ||
| with: | ||
| compiler: gcc-${{ matrix.compiler }} | ||
|
|
||
| - name: Install CMake | ||
| uses: seqan/actions/setup-cmake@main | ||
| with: | ||
| cmake: 3.16.9 | ||
| FILE="build_system/package-lock.cmake" | ||
| sed -i -E 's@(set \(SEQAN3_\S+_VERSION )[^\)]+\)@\1main)@g' $FILE | ||
| sed -i -E 's@VERSION( \$\{SEQAN3_\S+_VERSION\})@GIT_TAG\1@g' $FILE | ||
| sed -i -E 's@SEQAN3_(SDSL|CEREAL)_VERSION main@SEQAN3_\1_VERSION master@g' $FILE | ||
| cat $FILE | ||
| - name: Configure tests | ||
| run: | | ||
| mkdir seqan3-build | ||
| cd seqan3-build | ||
| mkdir build && cd build | ||
| cmake ../seqan3/test/${{ matrix.build }} -DCMAKE_BUILD_TYPE=Release \ | ||
| -DCMAKE_CXX_FLAGS="${{ matrix.cxx_flags }}" \ | ||
| -DSEQAN3_BENCHMARK_MIN_TIME=0.01 | ||
| case "${{ matrix.build }}" in | ||
| unit) make -j2 gtest_build;; | ||
| snippet) make -j2 gtest_build;; | ||
| performance) make -j2 gbenchmark_build;; | ||
| header) make -j2 gtest_build gbenchmark_build;; | ||
| unit) make gtest_main;; | ||
| snippet) make gtest_main;; | ||
| performance) make benchmark_main;; | ||
| header) make gtest_main benchmark_main;; | ||
| esac | ||
| - name: Build tests | ||
| working-directory: build | ||
| run: | | ||
| cd seqan3-build | ||
| make -k -j2 2>&1 | tee build.log | ||
| make -k 2>&1 | tee build.log | ||
| - name: Setup Python | ||
| if: ${{ failure() }} | ||
|
|
@@ -110,38 +78,47 @@ jobs: | |
| - name: Process Log | ||
| if: ${{ failure() }} | ||
| run: | | ||
| FILE="seqan3/.github/ISSUE_TEMPLATE/cron_comment_template.md" | ||
| python3 seqan3/.github/workflows/scripts/process_compiler_error_log.py seqan3-build/build.log >> $FILE | ||
| FILE=".github/ISSUE_TEMPLATE/cron_comment_template.md" | ||
| python3 .github/workflows/scripts/process_compiler_error_log.py build/build.log >> $FILE | ||
| - name: Create comment body | ||
| if: ${{ failure() }} | ||
| id: comment-body | ||
| run: | | ||
| FILE="seqan3/.github/ISSUE_TEMPLATE/cron_comment_template.md" | ||
| URL="$GITHUB_SERVER_URL/$GITHUB_REPOSITORY/actions/runs/$GITHUB_RUN_ID" | ||
| sed -i "s@{{ build }}@${{ matrix.build }}@" $FILE | ||
| sed -i "s@{{ compiler }}@${{ matrix.compiler }}@" $FILE | ||
| sed -i "s@{{ url }}@$URL@" $FILE | ||
| echo "body<<EOF" >> $GITHUB_OUTPUT | ||
| cat $FILE >> $GITHUB_OUTPUT | ||
| echo "EOF" >> $GITHUB_OUTPUT | ||
| if [[ "${{ job.status }}" == "success" ]]; then | ||
| echo "body=Success ${{ matrix.build }} on ${{ matrix.compiler }}" >> $GITHUB_OUTPUT | ||
| else | ||
| FILE=".github/ISSUE_TEMPLATE/cron_comment_template.md" | ||
| URL="$GITHUB_SERVER_URL/$GITHUB_REPOSITORY/actions/runs/$GITHUB_RUN_ID" | ||
| sed -i "s@{{ build }}@${{ matrix.build }}@" $FILE | ||
| sed -i "s@{{ compiler }}@${{ matrix.compiler }}@" $FILE | ||
| sed -i "s@{{ url }}@$URL@" $FILE | ||
| echo "body<<EOF" >> $GITHUB_OUTPUT | ||
| cat $FILE >> $GITHUB_OUTPUT | ||
| echo "EOF" >> $GITHUB_OUTPUT | ||
| fi | ||
| - name: Reopen issue | ||
| if: ${{ failure() }} | ||
| uses: octokit/[email protected] | ||
| with: | ||
| route: PATCH /repos/{owner}/{repo}/issues/{issue_number} | ||
| owner: ${{ github.repository_owner }} | ||
| repo: seqan3 | ||
| issue_number: ${{ env.ISSUE }} | ||
| state: "open" | ||
| if: failure() | ||
| run: gh issue reopen ${{ env.ISSUE }} | ||
| env: | ||
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | ||
| GH_TOKEN: ${{ secrets.SEQAN_ACTIONS_PAT }} | ||
| GH_REPO: ${{ github.repository }} | ||
|
|
||
| - name: Create comment | ||
| if: ${{ failure() }} | ||
| - name: Find Comment | ||
| if: always() | ||
| uses: peter-evans/find-comment@v3 | ||
| id: find_comment | ||
| with: | ||
| issue-number: ${{ env.ISSUE }} | ||
| body-includes: ${{ matrix.build }} on ${{ matrix.compiler }} | ||
|
|
||
| - name: Update comment | ||
| if: always() | ||
| uses: peter-evans/create-or-update-comment@v4 | ||
| with: | ||
| comment-id: ${{ steps.find_comment.outputs.comment-id }} | ||
| issue-number: ${{ env.ISSUE }} | ||
| body: ${{ steps.comment-body.outputs.body }} | ||
|
|
||
| edit-mode: replace | ||
| token: ${{ secrets.SEQAN_ACTIONS_PAT }} | ||
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