bitscore margine change

steineggerlab · Feb 11, 2024 · a7fefa2 · a7fefa2
1 parent a6b1928
commit a7fefa2
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Showing 2 changed files with 4 additions and 3 deletions.
diff --git a/src/strucclustutils/createcomplexreport.h b/src/strucclustutils/createcomplexreport.h
@@ -11,7 +11,7 @@ const double FILTERED_OUT = 0.0;
 const unsigned int UNCLUSTERED = 0;
 const unsigned int CLUSTERED = 1;
 const unsigned int MIN_PTS = 2;
-const float BIT_SCORE_MARGIN = 0.9;
+const float BIT_SCORE_MARGIN = 0.7;
 const float DEF_BIT_SCORE = -1.0;
 const int UNINITIALIZED = 0;
 const float LEARNING_RATE = 0.1;

diff --git a/src/strucclustutils/scorecomplex.cpp b/src/strucclustutils/scorecomplex.cpp
@@ -327,10 +327,11 @@ class DBSCANCluster {
     unsigned int getAlnClusters() {
         // rbh filter
         filterAlnsByRBH();
+        fillDistMap();
         // To skip DBSCAN clustering when alignments are few enough.
         if (searchResult.alnVec.size() <= idealClusterSize)
             return checkClusteringNecessity();
-        fillDistMap();
+
         return runDBSCAN();
     }
 
@@ -483,7 +484,7 @@ class DBSCANCluster {
             neighbors.clear();
             if (searchResult.alnVec.size() < MULTIPLE_CHAIN)
                 finishDBSCAN();
-            fillDistMap();
+
             return runDBSCAN();
         }
         prevMaxClusterSize = neighbors.size();