Skip to content

Graceful handling of Numba import errors #96

Graceful handling of Numba import errors

Graceful handling of Numba import errors #96

Workflow file for this run

name: Jupyter Notebooks CI
on: [push, pull_request]
jobs:
Check-Notebooks:
runs-on: ubuntu-latest
defaults:
run:
shell: bash -el {0}
steps:
- name: check out repository code
uses: actions/checkout@v3
- name: set up conda environment
uses: conda-incubator/setup-miniconda@v2
with:
auto-update-conda: true
auto-activate-base: false
activate-environment: notebook-env
- name: Install tobac dependencies
run: |
conda install -c conda-forge --yes ffmpeg gcc jupyter pytables
conda install -c conda-forge --yes --file example_requirements.txt
- name: Install tobac
run: |
pip install .
- name: Find all notebook files
run: |
find . -type f -name '*.ipynb' > nbfiles.txt
cat nbfiles.txt
- name: Execute all notebook files
run: |
while IFS= read -r nbpath; do
jupyter nbconvert --inplace --ClearMetadataPreprocessor.enabled=True --clear-output $nbpath
jupyter nbconvert --to notebook --inplace --execute $nbpath
done < nbfiles.txt