MONI: A Pangenomic Index for Finding MEMs
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Sep 26, 2024 - C++
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maximal-exact-matches
Here are 4 public repositories matching this topic...
Finding Maximal Exact Matches (MEMs) using a Sampled LCP Array
sequencing dna mem genome-analysis genomic-data-analysis genomics-visualization mummer maximal-exact-matches
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Mar 7, 2024 - C
Fast detection of maximal exact matches via fixed sampling of query k-mers and Bloom filtering of index k-mers
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Jul 10, 2020 - C++
Multiple sequence alignment tool that builds on the concept of seed-and-extend algorithms
bioinformatics genomics cpp dna genome-analysis msa maximal-exact-matches multiple-sequence-alignment seed-and-extend
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Updated
Jun 5, 2024 - C++
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