nextstrain
Here are 26 public repositories matching this topic...
gentoo portage overlay for nextstrain.org/ncov building.
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Mar 14, 2020 - Shell
Repository for Allergy Immunology and Cell Biology Unit (AICBU), University of Sri Jayewardenepura, Sri Lanka.
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Jul 25, 2021 - R
interactive maximum-likelihood phylogenies for SARS-CoV-2 genomes and variants of concern from Bangladesh
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Jun 22, 2022
Nextstrain build configuration for maintaining https://nextstrain.org/community/aicbu/ncov/srilanka
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May 17, 2021 - Python
Parallelization of Nextstrain builds and parameter testing using Nextflow
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May 18, 2022 - Nextflow
Nextflow pipeline for generation of BCCDC routine SARS-CoV-2 phylogenetic trees to be visualized with Auspice.
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Feb 17, 2024 - Python
BA.2.86 project with Sigal lab
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Nov 8, 2023 - Python
Collective list of active repositories providing tracking as well as datasets to defeat and restrict the widespread of Novel CoronaVirus
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Mar 20, 2020
Spike-only SARS-CoV-2 Nextstrain build
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Dec 13, 2023 - Python
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Jul 1, 2024 - Python
Nextflow pipeline for generation of phylogenetic trees to be visualized in Auspice.
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Mar 19, 2024 - Nextflow
VariantHunter is a tool for fast detection of emerging SARS-CoV-2 variants. It's an highly flexible and user friendly application for the systematic monitoring of the evolution of SARS-CoV-2 both at global and regional level.
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Apr 23, 2023 - Vue
SARS-CoV-2 variant growth rates and frequency forecasts
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Jun 7, 2024 - Python
Renders SVG schema of SARS-CoV-2 clade as defined by Nextstrain
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Apr 22, 2024 - JavaScript
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