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Jenkins update build 156.
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galaxy-au-tools-jenkins-bot committed Jul 12, 2023
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18 changes: 18 additions & 0 deletions automated_tool_installation_log.tsv
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Expand Up @@ -5231,3 +5231,21 @@ Update 155 05/07/23 14:53:58 openms_targetedfileconverter False Tests failed gal
Update 155 05/07/23 14:56:02 openms_xmlvalidator False Tests failed galaxyp f036e8cf1a55 f036e8cf1a55 Staging Testing 0/1 Proteomics toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_155/install_log.txt
Update 155 05/07/23 15:06:53 salmon False Tests failed bgruening 15cd64d7c58b 15cd64d7c58b Staging Testing 10/11 RNA-seq toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_155/install_log.txt
Install 1298 11/07/23 12:19:45 data_manager_build_bracken_database True Installed iuc 5c8a23ccb14a 5c8a23ccb14a 0/0 0/0 None toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/install_build_1298/install_log.txt
Update 156 12/07/23 11:40:44 cactus_cactus False Tests failed galaxy-australia 9eeb13a92d79 9eeb13a92d79 Staging Testing 3/4 Multiple Alignments toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_156/install_log.txt
Update 156 12/07/23 12:01:56 cactus_export False Installed galaxy-australia d7ce0ec78e51 d7ce0ec78e51 5/5 5/5 Multiple Alignments toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_156/install_log.txt
Update 156 12/07/23 12:05:25 cat_bins False Tests failed iuc 31853794ace2 31853794ace2 Staging Testing 0/4 Metagenomic Analysis toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_156/install_log.txt
Update 156 12/07/23 12:13:45 chipseeker False Tests failed rnateam 8bd92f2404dd 8bd92f2404dd Staging Testing 0/6 Annotation toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_156/install_log.txt
Update 156 12/07/23 12:21:04 count_objects False Installed imgteam 5bf8eb50b280 5bf8eb50b280 1/1 1/1 Imaging toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_156/install_log.txt
Update 156 12/07/23 12:27:13 dada2_assigntaxonomyaddspecies False Tests failed iuc 76d3d2b10738 76d3d2b10738 Staging Testing 2/3 Metagenomic Analysis toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_156/install_log.txt
Update 156 12/07/23 12:31:27 deeptools_plot_heatmap False Tests failed bgruening 25d830337d31 25d830337d31 Staging Testing 0/2 DeepTools toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_156/install_log.txt
Update 156 12/07/23 12:36:01 encyclopedia_encyclopedia False Tests failed galaxyp eac99effe86f eac99effe86f Staging Testing 0/1 Proteomics toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_156/install_log.txt
Update 156 12/07/23 12:38:00 encyclopedia_searchtolib False Tests failed galaxyp fb192dd6658a fb192dd6658a Staging Testing 0/2 Proteomics toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_156/install_log.txt
Update 156 12/07/23 12:39:59 encyclopedia_walnut False Tests failed galaxyp 0d2e93e01e68 0d2e93e01e68 Staging Testing 0/1 Proteomics toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_156/install_log.txt
Update 156 12/07/23 12:48:05 lastz False Tests failed devteam 37b497aa133f 37b497aa133f Staging Testing 8/10 Mapping toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_156/install_log.txt
Update 156 12/07/23 12:50:12 openms_decoydatabase False Tests failed galaxyp 25529df60a81 25529df60a81 Staging Testing 0/4 Proteomics toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_156/install_log.txt
Update 156 12/07/23 12:52:16 openms_targetedfileconverter False Tests failed galaxyp 9c70a651a53e 9c70a651a53e Staging Testing 0/20 Proteomics toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_156/install_log.txt
Update 156 12/07/23 12:54:23 openms_xmlvalidator False Tests failed galaxyp f036e8cf1a55 f036e8cf1a55 Staging Testing 0/1 Proteomics toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_156/install_log.txt
Update 156 12/07/23 13:44:15 pangolin False Installed iuc 9d61d3fa046c 9d61d3fa046c 4/4 4/4 Phylogenetics toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_156/install_log.txt
Update 156 12/07/23 13:54:09 salmon False Tests failed bgruening 15cd64d7c58b 15cd64d7c58b Staging Testing 10/11 RNA-seq toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_156/install_log.txt
Update 156 12/07/23 14:54:14 seurat False Installed iuc fab6ff46e019 fab6ff46e019 4/4 4/4 RNA-seq toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_156/install_log.txt
Update 156 12/07/23 14:58:07 uniprotxml_downloader False Tests failed galaxyp a371252a2cf6 a371252a2cf6 Staging Testing 0/7 Proteomics toolshed.g2.bx.psu.edu /var/lib/jenkins/galaxy_tool_automation/update_build_156/install_log.txt
72 changes: 36 additions & 36 deletions staging.usegalaxy.org.au/annotation.yml
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Expand Up @@ -2,11 +2,11 @@ tools:
- name: abricate
owner: iuc
revisions:
- 78c75f134c16
- c2ef298da409
- 4efdca267d51
- 6e9aea89e388
- 78c75f134c16
- 3f3e247c053d
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- 6e9aea89e388
tool_panel_section_label: Annotation
tool_shed_url: toolshed.g2.bx.psu.edu
- name: aegean_canongff3
Expand Down Expand Up @@ -36,20 +36,20 @@ tools:
- name: annotatemyids
owner: iuc
revisions:
- fe3ca740a485
- 1aae04680c4b
- b5d8e5475247
- 4f2967b27e67
- f29602ae449e
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- fe3ca740a485
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- 4f2967b27e67
- b5d8e5475247
tool_panel_section_label: Annotation
tool_shed_url: toolshed.g2.bx.psu.edu
- name: antismash
owner: bgruening
revisions:
- e78e25d3b4bd
- bc88856eddab
- e78e25d3b4bd
tool_panel_section_label: Annotation
tool_shed_url: toolshed.g2.bx.psu.edu
- name: augustus_training
Expand All @@ -64,8 +64,8 @@ tools:
owner: bgruening
revisions:
- ca6d970d931c
- 28433faa6e42
- 09855551d713
- 28433faa6e42
tool_panel_section_label: Annotation
tool_shed_url: toolshed.g2.bx.psu.edu
- name: bakta
Expand All @@ -78,8 +78,8 @@ tools:
owner: iuc
revisions:
- 7355bbf5e05f
- 8fd427007e93
- fe48aa4ccd5e
- 8fd427007e93
tool_panel_section_label: Annotation
tool_shed_url: toolshed.g2.bx.psu.edu
- name: chipseeker
Expand Down Expand Up @@ -116,17 +116,17 @@ tools:
- name: funannotate_annotate
owner: iuc
revisions:
- 582fd74dc2a1
- 9f2455341fac
- 14f588312c56
- 582fd74dc2a1
tool_panel_section_label: Annotation
tool_shed_url: toolshed.g2.bx.psu.edu
- name: funannotate_clean
owner: iuc
revisions:
- 30fb23d4c31c
- a230ea445788
- 73428a792541
- a230ea445788
- 30fb23d4c31c
tool_panel_section_label: Annotation
tool_shed_url: toolshed.g2.bx.psu.edu
- name: funannotate_compare
Expand All @@ -140,17 +140,17 @@ tools:
- name: funannotate_predict
owner: iuc
revisions:
- 7abc5f6dd595
- 2bba2ff070d9
- 7abc5f6dd595
- f31125bb85ea
tool_panel_section_label: Annotation
tool_shed_url: toolshed.g2.bx.psu.edu
- name: funannotate_sort
owner: iuc
revisions:
- 52af33194019
- b3cf4684e9c7
- d3af38b9c7e1
- 52af33194019
tool_panel_section_label: Annotation
tool_shed_url: toolshed.g2.bx.psu.edu
- name: get_orfs_or_cdss
Expand All @@ -162,8 +162,8 @@ tools:
- name: gff_to_prot
owner: iuc
revisions:
- 79261884facd
- 2aea122fbd25
- 79261884facd
- 07d7991bf205
tool_panel_section_label: Annotation
tool_shed_url: toolshed.g2.bx.psu.edu
Expand All @@ -176,10 +176,10 @@ tools:
- name: goseq
owner: iuc
revisions:
- 602de62d995b
- ef2ad746b589
- 8b3e3657034e
- 43798b4caee0
- 602de62d995b
- 8b3e3657034e
tool_panel_section_label: Annotation
tool_shed_url: toolshed.g2.bx.psu.edu
- name: goslimmer
Expand Down Expand Up @@ -264,11 +264,11 @@ tools:
- name: prokka
owner: crs4
revisions:
- d643e3b03500
- 8a22554cdde2
- bf68eb663bc3
- a17498c603ec
- bf68eb663bc3
- d643e3b03500
- eaee459f3d69
- 8a22554cdde2
tool_panel_section_label: Annotation
tool_shed_url: toolshed.g2.bx.psu.edu
- name: red
Expand All @@ -280,15 +280,15 @@ tools:
- name: repeat_masker
owner: bgruening
revisions:
- ba6d2c32f797
- 3f987772e283
- ba6d2c32f797
tool_panel_section_label: Annotation
tool_shed_url: toolshed.g2.bx.psu.edu
- name: repeatmodeler
owner: csbl
revisions:
- 8661b2607b7e
- 41bfbaf3c959
- 8661b2607b7e
tool_panel_section_label: Annotation
tool_shed_url: toolshed.g2.bx.psu.edu
- name: rgi
Expand All @@ -306,21 +306,21 @@ tools:
- name: snpeff
owner: iuc
revisions:
- 68693743661e
- 5c7b70713fb5
- 5b80f544c67f
- 5a29ab10dba6
- cfcf33df7fc0
- 268d162b9c49
- 5b80f544c67f
- 8f92c2b26e6d
- cfcf33df7fc0
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- 68693743661e
tool_panel_section_label: Annotation
tool_shed_url: toolshed.g2.bx.psu.edu
- name: snpsift
owner: iuc
revisions:
- 2b3e65a4252f
- 09d6806c609e
- 5fab4f81391d
- 09d6806c609e
- 2b3e65a4252f
tool_panel_section_label: Annotation
tool_shed_url: toolshed.g2.bx.psu.edu
- name: snptools
Expand All @@ -344,22 +344,22 @@ tools:
- name: tbprofiler
owner: iuc
revisions:
- ba6f87115e13
- e1a9d6fd258d
- 037a11682176
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- ac8250086ac3
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- 037a11682176
- 809dfc93d593
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tool_panel_section_label: Annotation
tool_shed_url: toolshed.g2.bx.psu.edu
- name: transit_gumbel
owner: iuc
revisions:
- 8fc50fe60127
- f50807720df1
- 8fc50fe60127
tool_panel_section_label: Annotation
tool_shed_url: toolshed.g2.bx.psu.edu
- name: trna_prediction
Expand Down
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