Update Genome count #126
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name: Update Genome count | |
on: | |
workflow_dispatch: | |
schedule: | |
- cron: '00 23 * * 0' | |
jobs: | |
update-citations: | |
runs-on: ubuntu-latest | |
steps: | |
- name: Checkout Branch | |
uses: actions/checkout@v2 | |
- name: Setup Python | |
uses: actions/setup-python@v2 | |
with: | |
python-version: '3.9' | |
- name: Install dependencies | |
run: | | |
python -m pip install pandas | |
- name: Run update script | |
run: python annotate_genome_count.py | |
- name: Create Pull Request | |
uses: peter-evans/create-pull-request@v3 | |
with: | |
commit-message: Update VGP/ERGA Genome count | |
title: Update VGP/ERGA Genome count | |
body: | | |
This is an auto-generated PR with the updated `genome count` of the [Galaxy Assembly](https://assembly.usegalaxy.eu) site. | |
branch: update-genome-count | |
delete-branch: true |