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Achievement: Galaxy BrainAchievement: YOLOAchievement: Starstruckx2Achievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

Achievements

Achievement: Galaxy BrainAchievement: YOLOAchievement: Starstruckx2Achievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

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  1. BayraktarLab/cell2location BayraktarLab/cell2location Public

    Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)

    Python 320 58

  2. dissatisfaction-ai/scHierarchy dissatisfaction-ai/scHierarchy Public

    A toolking for cell type hierarchies: marker selection & consistent classification

    Python 20 1

  3. ParetoTI ParetoTI Public

    R toolbox for Archetypal Analysis and Pareto Task Inference on single cell data (based on ParTI)

    R 30 7

  4. SpaceJam SpaceJam Public

    SpaceJam is an analysis platform for performing data exploration, gene DE analysis, estimating cell type abundance and prioritising cell communication events using Nanostring GeoMx data. We use pro…

    HTML 3

  5. PItools PItools Public

    Protein interaction data tools, retrieving data from IntAct and most other databases

    R 3

  6. orthologsBioMART orthologsBioMART Public

    One-liner for mapping orthologous genes in both R and python using ENSEMBL BioMART

    R 19 2