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@dozy dozy released this 20 Nov 18:01
· 717 commits to master since this release

change to using teepot instead of tee or mbuffer
change back to bamstreamingmarkduplicates (from bammarkduplicates2)
addition of samtools stats (both -F 0x900 and -F 0XB00) - bamcheck also still used, though now with -F 0x900
md5 for cram files
bamseqchksum outputs saved to disk