Code

Draft: BowtieBuilder status#150

Code

Draft

ctrlaltaf wants to merge 31 commits intoReed-CompBio:masterReed-CompBio/spras:masterfrom ctrlaltaf:btbctrlaltaf/spras:btbCopy head branch name to clipboard

+327-182

Commits

Commits on Feb 20, 2024

• added placeholder files

  ctrlaltaf

  committed
  d731ae2

Commits on Feb 29, 2024

• Draft: btb

  ctrlaltaf

  committed
  99bf632

Commits on Mar 8, 2024

• goes through snakemake process without any errors

  ctrlaltaf

  committed
  725eeb0

Commits on Apr 3, 2024

• Added new test files

  ctrlaltaf

  committed
  5534087

Commits on Jun 5, 2024

• LN testing complete

  Show description for d289f2f
  gabeah

  committed
  d289f2f

• dockerfile is made!

  gabeah

  committed
  0fe3c2a

Commits on Jun 6, 2024

• working on LN implementation

  gabeah

  committed
  fc3ba80

Commits on Jun 7, 2024

• dealing with some errors

  gabeah

  committed
  fe47da5

• Step 4 completed

  gabeah

  committed
  f887fca

• stuck on modifying generate inputs and parse outputs

  gabeah

  committed
  877707c

Commits on Jun 10, 2024

• finished?

  gabeah

  committed
  8dfa330

Commits on Jun 11, 2024

• finished changes as defined in code review

  gabeah

  committed
  dbaacf1

Commits on Jun 21, 2024

• added files for BTB PR

  gabeah

  committed
  1caca3a

• working on btb pr

  gabeah

  committed
  a59e281

Commits on Jun 24, 2024

• continual testing for btb

  gabeah

  committed
  7c46104

• continual testing for btb

  gabeah

  committed
  e182c89

• prepping for PR

  gabeah

  committed
  12369a4

• conflicts fixed?

  gabeah

  committed
  ddde72b

• Merge branch 'ctrlaltaf-btb' into btb

  gabeah

  committed
  64b8783

Commits on Jun 25, 2024

• passing two tests, need to pass two more

  gabeah

  committed
  01aa15f

Commits on Jun 26, 2024

• losing me mind over pytest :)

  gabeah

  committed
  740cfb7

Commits on Jun 28, 2024

• three tests passinggit add .

  gabeah

  committed
  f82b611

Commits on Jul 1, 2024

• continuing finishing test functions for PR

  gabeah

  committed
  dbf81a0

• oops, forgot some extra files

  gabeah

  committed
  d0822bb

Commits on Jul 3, 2024

• wrapping finished?

  gabeah

  committed
  7d10dbb

• wrapping finished

  gabeah

  committed
  c3310fe

Commits on Jul 8, 2024

• updated dockerfile/config to reflect new repo/dockerhub images

  gabeah

  committed
  f3d4006

Commits on Jul 9, 2024

• beginning PR fixes

  gabeah

  committed
  40ad34f

• PR changes finished/comments have been made

  gabeah

  committed
  3b9d70e

Commits on Jul 11, 2024

• small fixes, preparing to merge main and resolve conflicts

  gabeah

  committed
  027ecbd

• Merge branch 'master' into btb

  gabeah

  authored
  e149f0e