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Issues: carpentries-incubator/snakemake-novice-bioinformatics
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Several concerns on Ep 11 (new assembly workflow)
reviewer
Issues arising from comments on https://github.com/carpentries-lab/reviews/issues/17
#71
opened Aug 29, 2024 by
tbooth
Describe global and per-rule requirements
reviewer
Issues arising from comments on https://github.com/carpentries-lab/reviews/issues/17
#70
opened Aug 29, 2024 by
tbooth
Break down ep05 into smaller tasks
reviewer
Issues arising from comments on https://github.com/carpentries-lab/reviews/issues/17
type:enhancement
Propose enhancement to the lesson
#68
opened Jul 31, 2024 by
tbooth
Reconsider use of Figshare for the sample data
reviewer
Issues arising from comments on https://github.com/carpentries-lab/reviews/issues/17
#67
opened Jul 31, 2024 by
tbooth
Solution to Ep07 does not work
reviewer
Issues arising from comments on https://github.com/carpentries-lab/reviews/issues/17
#66
opened Jul 29, 2024 by
tbooth
Introduce lists of inputs/outputs before named inputs and outputs
reviewer
Issues arising from comments on https://github.com/carpentries-lab/reviews/issues/17
#64
opened Jul 26, 2024 by
tbooth
Use the log directive from the start
reviewer
Issues arising from comments on https://github.com/carpentries-lab/reviews/issues/17
#63
opened Jul 26, 2024 by
tbooth
Be careful describing Kallisto and Salmon
reviewer
Issues arising from comments on https://github.com/carpentries-lab/reviews/issues/17
#62
opened Jul 26, 2024 by
tbooth
Consider explicitly introducing "dot"
reviewer
Issues arising from comments on https://github.com/carpentries-lab/reviews/issues/17
type:enhancement
Propose enhancement to the lesson
#61
opened Jul 26, 2024 by
tbooth
Chapter 4 solution does not work
reviewer
Issues arising from comments on https://github.com/carpentries-lab/reviews/issues/17
status:need more info
More information needed
type:bug
Code included in the lesson needs to be fixed
#60
opened Jul 25, 2024 by
tbooth
Motivation for countreads rule
reviewer
Issues arising from comments on https://github.com/carpentries-lab/reviews/issues/17
#59
opened Jul 24, 2024 by
tbooth
Bioinformatics concepts and best practise should be more thoroughly addressed
reviewer
Issues arising from comments on https://github.com/carpentries-lab/reviews/issues/17
#55
opened Jul 17, 2024 by
tbooth
Clarifying how to use the editor
reviewer
Issues arising from comments on https://github.com/carpentries-lab/reviews/issues/17
#52
opened Sep 22, 2023 by
tbooth
Introducing conda in the setup page
reviewer
Issues arising from comments on https://github.com/carpentries-lab/reviews/issues/17
#50
opened Sep 21, 2023 by
tbooth
Relax the prerequisites for taking the lesson
reviewer
Issues arising from comments on https://github.com/carpentries-lab/reviews/issues/17
#49
opened Sep 21, 2023 by
tbooth
Another option for formatting multi-line shell commands
reviewer
Issues arising from comments on https://github.com/carpentries-lab/reviews/issues/17
#48
opened Sep 21, 2023 by
tbooth
Keeping up with Snakemake changes
reviewer
Issues arising from comments on https://github.com/carpentries-lab/reviews/issues/17
#47
opened Sep 21, 2023 by
tbooth
Reconsider Putting output before input
reviewer
Issues arising from comments on https://github.com/carpentries-lab/reviews/issues/17
#46
opened Sep 21, 2023 by
tbooth
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