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pipeliner: add note in 'invoke' method that it implicitly moves to w… Python CI #1250: Commit aa2f948 pushed by pjbriggs
December 1, 2023 16:17 34m 25s pipeliner-conda-dependency-resolution-as-jobs
pipeliner-conda-dependency-resolution-as-jobs
December 1, 2023 16:17 34m 25s
Merge pull request #916 from fls-bioinformatics-core/qc-pipeline-spli… Python CI #1249: Commit e14b9b3 pushed by pjbriggs
December 1, 2023 16:11 38m 3s devel
devel
December 1, 2023 16:11 38m 3s
Implement functionality for per-lane QC in QC pipeline Python CI #1248: Pull request #916 synchronize by pjbriggs
December 1, 2023 12:58 32m 22s qc-pipeline-split-fastqs-by-lane
qc-pipeline-split-fastqs-by-lane
December 1, 2023 12:58 32m 22s
Update documentation to include info on splitting Fastqs by lane in QC. Python CI #1247: Commit bb0215e pushed by pjbriggs
December 1, 2023 12:58 32m 46s qc-pipeline-split-fastqs-by-lane
qc-pipeline-split-fastqs-by-lane
December 1, 2023 12:58 32m 46s
Implement functionality for per-lane QC in QC pipeline Python CI #1246: Pull request #916 synchronize by pjbriggs
November 30, 2023 16:21 34m 46s qc-pipeline-split-fastqs-by-lane
qc-pipeline-split-fastqs-by-lane
November 30, 2023 16:21 34m 46s
'run_qc' command: split undetermined Fastqs by lane if config option … Python CI #1245: Commit 033fbfd pushed by pjbriggs
November 30, 2023 16:21 33m 13s qc-pipeline-split-fastqs-by-lane
qc-pipeline-split-fastqs-by-lane
November 30, 2023 16:21 33m 13s
Implement functionality for per-lane QC in QC pipeline Python CI #1244: Pull request #916 synchronize by pjbriggs
November 27, 2023 17:44 33m 3s qc-pipeline-split-fastqs-by-lane
qc-pipeline-split-fastqs-by-lane
November 27, 2023 17:44 33m 3s
qc/verification: update 'verify_project' to use Fastqs from metadata … Python CI #1243: Commit 57b3172 pushed by pjbriggs
November 27, 2023 17:44 34m 3s qc-pipeline-split-fastqs-by-lane
qc-pipeline-split-fastqs-by-lane
November 27, 2023 17:44 34m 3s
Implement functionality for per-lane QC in QC pipeline Python CI #1242: Pull request #916 opened by pjbriggs
November 25, 2023 12:55 31m 31s qc-pipeline-split-fastqs-by-lane
qc-pipeline-split-fastqs-by-lane
November 25, 2023 12:55 31m 31s
run_qc.py: add '--split-fastqs-by-lane' advanced command line option. Python CI #1241: Commit 6573102 pushed by pjbriggs
November 25, 2023 12:50 31m 24s qc-pipeline-split-fastqs-by-lane
qc-pipeline-split-fastqs-by-lane
November 25, 2023 12:50 31m 24s
Merge pull request #914 from fls-bioinformatics-core/mock-fix-setting… Python CI #1240: Commit 2f015c4 pushed by pjbriggs
November 25, 2023 12:49 35m 23s devel
devel
November 25, 2023 12:49 35m 23s
Fix bug when creating Fastqs in mock analysis projects without specifying lanes Python CI #1239: Pull request #914 synchronize by pjbriggs
November 25, 2023 12:13 31m 46s mock-fix-setting-lane-in-Fastq-headers
mock-fix-setting-lane-in-Fastq-headers
November 25, 2023 12:13 31m 46s
mock: fix bug making Fastqs in MockAnalysisProject, when lane not spe… Python CI #1238: Commit 41e4405 pushed by pjbriggs
November 25, 2023 12:13 32m 31s mock-fix-setting-lane-in-Fastq-headers
mock-fix-setting-lane-in-Fastq-headers
November 25, 2023 12:13 32m 31s
Merge pull request #915 from fls-bioinformatics-core/fix-readthedocs-… Python CI #1237: Commit fd137e9 pushed by pjbriggs
November 25, 2023 12:09 32m 38s devel
devel
November 25, 2023 12:09 32m 38s
Fix documentation build failure on ReadTheDocs Python CI #1236: Pull request #915 synchronize by pjbriggs
November 25, 2023 11:27 34m 52s fix-readthedocs-build-failure
fix-readthedocs-build-failure
November 25, 2023 11:27 34m 52s
Remove invalid configuration option "python.system_packages" for Read… Python CI #1235: Commit eb317d7 pushed by pjbriggs
November 25, 2023 11:27 31m 50s fix-readthedocs-build-failure
fix-readthedocs-build-failure
November 25, 2023 11:27 31m 50s
Fix documentation build failure on ReadTheDocs Python CI #1234: Pull request #915 opened by pjbriggs
November 25, 2023 11:25 31m 26s fix-readthedocs-build-failure
fix-readthedocs-build-failure
November 25, 2023 11:25 31m 26s
Add a 'build' section to .readthedocs.yaml to specify OS and Python v… Python CI #1233: Commit 950d5e2 pushed by pjbriggs
November 25, 2023 11:23 32m 33s fix-readthedocs-build-failure
fix-readthedocs-build-failure
November 25, 2023 11:23 32m 33s
Merge pull request #910 from fls-bioinformatics-core/qc-pipeline-set-… Python CI #1232: Commit d78b7bf pushed by pjbriggs
November 25, 2023 11:18 32m 16s fix-readthedocs-build-failure
fix-readthedocs-build-failure
November 25, 2023 11:18 32m 16s
Fix bug when creating Fastqs in mock analysis projects without specifying lanes Python CI #1231: Pull request #914 opened by pjbriggs
November 25, 2023 11:09 31m 15s mock-fix-setting-lane-in-Fastq-headers
mock-fix-setting-lane-in-Fastq-headers
November 25, 2023 11:09 31m 15s
mock: fix bug making Fastqs in MockAnalysisProject, when lane not spe… Python CI #1230: Commit cc784b2 pushed by pjbriggs
November 25, 2023 11:04 34m 39s mock-fix-setting-lane-in-Fastq-headers
mock-fix-setting-lane-in-Fastq-headers
November 25, 2023 11:04 34m 39s
Reimplement conda dependency resolution as separate jobs in 'pipeliner' module Python CI #1229: Pull request #903 synchronize by pjbriggs
November 10, 2023 12:56 42m 37s pipeliner-conda-dependency-resolution-as-jobs
pipeliner-conda-dependency-resolution-as-jobs
November 10, 2023 12:56 42m 37s
pipeliner: add note in 'invoke' method that it implicitly moves to w… Python CI #1228: Commit 467b4fe pushed by pjbriggs
November 10, 2023 12:56 36m 51s pipeliner-conda-dependency-resolution-as-jobs
pipeliner-conda-dependency-resolution-as-jobs
November 10, 2023 12:56 36m 51s
Reimplement conda dependency resolution as separate jobs in 'pipeliner' module Python CI #1227: Pull request #903 synchronize by pjbriggs
November 10, 2023 12:54 44m 35s pipeliner-conda-dependency-resolution-as-jobs
pipeliner-conda-dependency-resolution-as-jobs
November 10, 2023 12:54 44m 35s
pipeliner: explicitly set dispatcher work dir in PipelineTask.resolve… Python CI #1226: Commit d318d17 pushed by pjbriggs
November 10, 2023 12:54 32m 25s pipeliner-conda-dependency-resolution-as-jobs
pipeliner-conda-dependency-resolution-as-jobs
November 10, 2023 12:54 32m 25s
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