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Releases: molgenis/ngs-utils

ngs-utils 21.03.1

10 Mar 16:06
@RoanKanninga RoanKanninga
21.03.1
1ba2d2f
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ngs-utils 21.03.1 
Merge pull request #227 from RoanKanninga/master

cleanUpData_Array  + cleanUpData_NGS scripts
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ngs-utils 19.03.3

28 Mar 08:47
@RoanKanninga RoanKanninga
19.03.3
f6bd8c4
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ngs-utils 19.03.3

updated versions of the countCoverage + countCoveragePerGene

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ngs-utils 19.03.2

14 Mar 11:36
@RoanKanninga RoanKanninga
19.03.2
aa13ae9
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ngs-utils 19.03.2

small fix in CreateIlluminaSampleSheet_V2.pl

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ngs-utils 19.03.1

07 Mar 15:35
@kdelange kdelange
19.03.1
aa13ae9
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ngs-utils 19.03.1
  • bug fix makeSamplesheet_External_samples.sh
  • bug fix makeSamplesheet_inhouse_research.sh
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ngs-utils 19.02.1

05 Feb 11:21
@kdelange kdelange
19.02.1
a2ed804
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ngs-utils 19.02.1

New make sample sheet scrip for internal new sequence runs and for external samples.
Both added to the tortilla.sh.

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ngs-utils 18.12.1

06 Dec 19:04
@pneerincx pneerincx
18.12.1
71011ca
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ngs-utils 18.12.1
  • renameFastQs.bash: Added option to allow Ns in DNA barcodes.
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ngs-utils 18.11.2

29 Nov 12:43
@RoanKanninga RoanKanninga
18.11.2
633caad
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ngs-utils 18.11.2

updated checkValidationNGS script

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ngs-utils 18.11.1

12 Nov 12:38
@RoanKanninga RoanKanninga
18.11.1
9d8e8fc
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ngs-utils 18.11.1

small changes in prepareNGSbedfiles + updated countCoverage + updated checkValidation

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ngs_utils 18.10.1

23 Oct 13:19
@kdelange kdelange
18.10.1
b6ba20f
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ngs_utils 18.10.1

  • Added tool: CompareGenotypeCalls.

    • Calculate concordance between vcf files.

  • Fixed bug in regex for checking sequencingStartDate

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ngs-utils 18.09.1

01 Oct 12:56
@RoanKanninga RoanKanninga
18.09.1
8be27e9
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ngs-utils 18.09.1

  • prepare_NGS_bedfiles

    • Create only symlinks if exome is false
    • fix per base interval_list making

  • checkSamplesheet

    • Improved checkSamplesheet procedure
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