Updated test data paths batch 9 #12819
GallVptest.yml
on: pull_request
Matrix: nf-test
Matrix: nf-core-lint-modules
Matrix: nf-core-lint-modules
Matrix: pytest
confirm-pass
0s
Annotations
40 errors and 2 warnings
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nf-core-lint-modules (agat/convertspgff2gtf)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-core-lint-modules (agat/convertspgxf2gxf)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-core-lint-modules (agat/convertspgff2tsv)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-core-lint-modules (agat/spaddintrons)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-core-lint-modules (agat/spstatistics)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-core-lint-modules (agat/sqstatbasic)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-core-lint-modules (centrifuge/kreport)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-core-lint-modules (barrnap)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/agat/convertspgxf2gxf, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/agat/convertspgxf2gxf, singularity)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-core-lint-modules (centrifuge/centrifuge)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-core-lint-modules (smoove/call)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/agat/convertspgff2tsv, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/agat/convertspgff2tsv, conda)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/agat/sqstatbasic, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/agat/convertspgff2tsv, singularity)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/agat/convertspgxf2gxf, conda)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/centrifuge/kreport, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/centrifuge/kreport, conda)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/agat/spstatistics, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/agat/convertspgff2gtf, conda)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/agat/spaddintrons, conda)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/agat/convertspgff2gtf, singularity)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/agat/spaddintrons, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/agat/spstatistics, singularity)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/barrnap, conda)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/agat/spaddintrons, singularity)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/agat/spstatistics, conda)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/agat/sqstatbasic, conda)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/agat/sqstatbasic, singularity)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/barrnap, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/centrifuge/kreport, singularity)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/centrifuge/centrifuge, conda)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/barrnap, singularity)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/centrifuge/centrifuge, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/smoove/call, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/centrifuge/centrifuge, singularity)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/smoove/call, singularity)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/smoove/call, conda)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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nf-test (modules/nf-core/agat/convertspgff2gtf, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6066' exists
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pytest-changes
The following actions uses Node.js version which is deprecated and will be forced to run on node20: mirpedrol/paths-filter@main. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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pre-commit
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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