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Pull requests: nf-core/modules

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Pull requests list

Add TAR module
#6772 opened Oct 11, 2024 by jfy133 Loading…
17 tasks
2
Fixed linked site location for bbam tools
#6768 opened Oct 10, 2024 by J-Moravec Loading…
Be consistent in GHA names, only use Setup, remove Set up or Install
#6766 opened Oct 10, 2024 by maxulysse Loading…
17 tasks
11
Update arriba no check
#6765 opened Oct 10, 2024 by rannick Loading…
11 of 17 tasks
1
@rannick
Limma mixed models feature
#6753 opened Oct 8, 2024 by KamilMaliszArdigen Loading…
17 tasks
21
Added samshee
#6749 opened Oct 7, 2024 by nschcolnicov Loading…
17 tasks
18
Arriba download update
#6745 opened Oct 7, 2024 by rannick Loading…
11 of 17 tasks
@rannick
1
pangolin - use seqera containers + nf-test; rm pytests
#6740 opened Oct 6, 2024 by sateeshperi Loading…
Pypgx/preparedepthofcoverage new module Adding a new module Ready for Review
#6729 opened Oct 4, 2024 by Jorisvansteenbrugge Loading…
11 tasks done
1
Pypgx/computecontrolstatistics new module Adding a new module Ready for Review
#6728 opened Oct 3, 2024 by Jorisvansteenbrugge Loading…
11 of 13 tasks
1
[do not merge] stress testing PR #6286
#6716 opened Sep 30, 2024 by adamrtalbot Loading…
5
chore(#6505): Capture actual version yaml instead of hash
#6704 opened Sep 27, 2024 by edmundmiller Loading…
@edmundmiller
Add irescue module new module Adding a new module Ready for Review
#6691 opened Sep 25, 2024 by bepoli Loading…
17 tasks done
1
Update pre-commit hook astral-sh/ruff-pre-commit to v0.6.9
#6682 opened Sep 21, 2024 by renovate bot Loading…
2 tasks
Fix typo in variable name in CHECKM/QA (plus some formatting fixes)
#6680 opened Sep 20, 2024 by jfy133 Loading…
17 tasks
2
update JSON schema for subworkflows meta.yml
#6679 opened Sep 20, 2024 by mirpedrol Loading…
7
Fix bcftools stubs to behave like program
#6666 opened Sep 19, 2024 by fellen31 • Draft
17 tasks
Script to fetch unique conda environments
#6659 opened Sep 17, 2024 by ewels • Draft
1
Migrate umitools/group to nf-test
#6653 opened Sep 16, 2024 by SPPearce Loading…
4
Update container image to include RTGtools
#6639 opened Sep 13, 2024 by Jorisvansteenbrugge • Draft
1 of 2 tasks
1
4
Shigapass
#6636 opened Sep 13, 2024 by maxlcummins Loading…
12 of 17 tasks
14
Dysgy==1.6.4
#6630 opened Sep 12, 2024 by poddarharsh15 Loading…
17 tasks
11
Set BWA and bwamem2 index memory dynamically
#6628 opened Sep 11, 2024 by edmundmiller Loading…
@edmundmiller
5
Lighter
#6626 opened Sep 11, 2024 by vtorda Loading…
17 tasks
17
Add deepsomatic module scaffolding
#6622 opened Sep 10, 2024 by vaxyzek • Draft
17 tasks
4
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