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Updated test data paths batch 8 #12822

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Updated test data paths batch 8

Updated test data paths batch 8 #12822

Run time

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Job Run time
pytest-changes
6s
pytest-changes
6s
nf-test-changes
29s
nf-test-changes
29s
pre-commit
16s
pre-commit
16s
prettier
55s
prettier
55s
editorconfig
9s
editorconfig
9s
pytest
0s
pytest
0s
nf-core-lint-modules (fastq_align_dna)
49s
nf-core-lint-modules (fastq_align_dna)
49s
nf-core-lint-modules (fastq_align_bowtie2)
50s
nf-core-lint-modules (fastq_align_bowtie2)
50s
nf-core-lint-modules (stringtie/merge)
2m 12s
nf-core-lint-modules (stringtie/merge)
2m 12s
nf-core-lint-modules (ampir)
2m 1s
nf-core-lint-modules (ampir)
2m 1s
nf-core-lint-modules (isoseq3/tag)
1m 58s
nf-core-lint-modules (isoseq3/tag)
1m 58s
nf-core-lint-modules (foldseek/easysearch)
2m 1s
nf-core-lint-modules (foldseek/easysearch)
2m 1s
nf-core-lint-modules (fcs/fcsadaptor)
2m 10s
nf-core-lint-modules (fcs/fcsadaptor)
2m 10s
nf-core-lint-modules (mosdepth)
1m 23s
nf-core-lint-modules (mosdepth)
1m 23s
nf-core-lint-modules (foldseek/createdb)
2m 4s
nf-core-lint-modules (foldseek/createdb)
2m 4s
nf-core-lint-modules (bowtie2/align)
2m 7s
nf-core-lint-modules (bowtie2/align)
2m 7s
nf-core-lint-modules (checkm2/predict)
2m 10s
nf-core-lint-modules (checkm2/predict)
2m 10s
nf-test (modules/nf-core/stringtie/merge, conda)
4m 21s
nf-test (modules/nf-core/stringtie/merge, conda)
4m 21s
nf-test (modules/nf-core/stringtie/merge, docker_self_hosted)
1m 28s
nf-test (modules/nf-core/stringtie/merge, docker_self_hosted)
1m 28s
nf-test (modules/nf-core/stringtie/merge, singularity)
2m 22s
nf-test (modules/nf-core/stringtie/merge, singularity)
2m 22s
nf-test (modules/nf-core/ampir, conda)
5m 5s
nf-test (modules/nf-core/ampir, conda)
5m 5s
nf-test (modules/nf-core/ampir, docker_self_hosted)
3m 1s
nf-test (modules/nf-core/ampir, docker_self_hosted)
3m 1s
nf-test (modules/nf-core/ampir, singularity)
2m 17s
nf-test (modules/nf-core/ampir, singularity)
2m 17s
nf-test (subworkflows/nf-core/fastq_align_dna, conda)
10m 33s
nf-test (subworkflows/nf-core/fastq_align_dna, conda)
10m 33s
nf-test (subworkflows/nf-core/fastq_align_dna, docker_self_hosted)
7m 25s
nf-test (subworkflows/nf-core/fastq_align_dna, docker_self_hosted)
7m 25s
nf-test (subworkflows/nf-core/fastq_align_dna, singularity)
6m 44s
nf-test (subworkflows/nf-core/fastq_align_dna, singularity)
6m 44s
nf-test (subworkflows/nf-core/fastq_align_bowtie2, conda)
9m 4s
nf-test (subworkflows/nf-core/fastq_align_bowtie2, conda)
9m 4s
nf-test (subworkflows/nf-core/fastq_align_bowtie2, docker_self_hosted)
3m 24s
nf-test (subworkflows/nf-core/fastq_align_bowtie2, docker_self_hosted)
3m 24s
nf-test (subworkflows/nf-core/fastq_align_bowtie2, singularity)
3m 42s
nf-test (subworkflows/nf-core/fastq_align_bowtie2, singularity)
3m 42s
nf-test (modules/nf-core/isoseq3/tag, conda)
3m 42s
nf-test (modules/nf-core/isoseq3/tag, conda)
3m 42s
nf-test (modules/nf-core/isoseq3/tag, docker_self_hosted)
1m 48s
nf-test (modules/nf-core/isoseq3/tag, docker_self_hosted)
1m 48s
nf-test (modules/nf-core/isoseq3/tag, singularity)
2m 7s
nf-test (modules/nf-core/isoseq3/tag, singularity)
2m 7s
nf-test (modules/nf-core/foldseek/easysearch, conda)
4m 23s
nf-test (modules/nf-core/foldseek/easysearch, conda)
4m 23s
nf-test (modules/nf-core/foldseek/easysearch, docker_self_hosted)
2m 17s
nf-test (modules/nf-core/foldseek/easysearch, docker_self_hosted)
2m 17s
nf-test (modules/nf-core/foldseek/easysearch, singularity)
1m 24s
nf-test (modules/nf-core/foldseek/easysearch, singularity)
1m 24s
nf-test (modules/nf-core/fcs/fcsadaptor, docker_self_hosted)
5m 7s
nf-test (modules/nf-core/fcs/fcsadaptor, docker_self_hosted)
5m 7s
nf-test (modules/nf-core/fcs/fcsadaptor, singularity)
4m 59s
nf-test (modules/nf-core/fcs/fcsadaptor, singularity)
4m 59s
nf-test (modules/nf-core/mosdepth, conda)
5m 37s
nf-test (modules/nf-core/mosdepth, conda)
5m 37s
nf-test (modules/nf-core/mosdepth, docker_self_hosted)
3m 44s
nf-test (modules/nf-core/mosdepth, docker_self_hosted)
3m 44s
nf-test (modules/nf-core/mosdepth, singularity)
3m 59s
nf-test (modules/nf-core/mosdepth, singularity)
3m 59s
nf-test (modules/nf-core/foldseek/createdb, conda)
4m 0s
nf-test (modules/nf-core/foldseek/createdb, conda)
4m 0s
nf-test (modules/nf-core/foldseek/createdb, docker_self_hosted)
2m 8s
nf-test (modules/nf-core/foldseek/createdb, docker_self_hosted)
2m 8s
nf-test (modules/nf-core/foldseek/createdb, singularity)
2m 12s
nf-test (modules/nf-core/foldseek/createdb, singularity)
2m 12s
nf-test (modules/nf-core/bowtie2/align, conda)
13m 55s
nf-test (modules/nf-core/bowtie2/align, conda)
13m 55s
nf-test (modules/nf-core/bowtie2/align, docker_self_hosted)
5m 34s
nf-test (modules/nf-core/bowtie2/align, docker_self_hosted)
5m 41s
nf-test (modules/nf-core/bowtie2/align, singularity)
6m 50s
nf-test (modules/nf-core/bowtie2/align, singularity)
6m 50s
nf-test (modules/nf-core/checkm2/predict, conda)
9m 55s
nf-test (modules/nf-core/checkm2/predict, conda)
9m 55s
nf-test (modules/nf-core/checkm2/predict, docker_self_hosted)
10m 4s
nf-test (modules/nf-core/checkm2/predict, docker_self_hosted)
10m 4s
nf-test (modules/nf-core/checkm2/predict, singularity)
11m 27s
nf-test (modules/nf-core/checkm2/predict, singularity)
11m 27s
confirm-pass
1s
confirm-pass
1s
6h 12m 45s