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update bismark apps #15928

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update bismark apps

update bismark apps #15928

Run time

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Job Run time
pre-commit
41s
pre-commit
41s
nf-test-changes
1m 8s
nf-test-changes
1m 8s
editorconfig
11s
editorconfig
11s
prettier
32s
prettier
32s
pytest-changes
6s
pytest-changes
6s
pytest
0s
pytest
0s
nf-core-lint-modules
0s
nf-core-lint-modules
0s
nf-core-lint-modules (bismark/coverage2cytosine)
1m 59s
nf-core-lint-modules (bismark/coverage2cytosine)
1m 59s
nf-core-lint-modules (bismark/report)
1m 12s
nf-core-lint-modules (bismark/report)
1m 12s
nf-core-lint-modules (bismark/deduplicate)
1m 8s
nf-core-lint-modules (bismark/deduplicate)
1m 8s
nf-core-lint-modules (bismark/summary)
1m 7s
nf-core-lint-modules (bismark/summary)
1m 7s
nf-core-lint-modules (bismark/methylationextractor)
1m 5s
nf-core-lint-modules (bismark/methylationextractor)
1m 5s
nf-test (modules/nf-core/bismark/coverage2cytosine, conda)
4m 36s
nf-test (modules/nf-core/bismark/coverage2cytosine, conda)
4m 36s
nf-core-lint-modules (bismark/genomepreparation)
1m 9s
nf-core-lint-modules (bismark/genomepreparation)
1m 9s
nf-test (modules/nf-core/bismark/coverage2cytosine, docker_self_hosted)
2m 24s
nf-test (modules/nf-core/bismark/coverage2cytosine, docker_self_hosted)
2m 24s
nf-test (modules/nf-core/bismark/coverage2cytosine, singularity)
2m 24s
nf-test (modules/nf-core/bismark/coverage2cytosine, singularity)
2m 24s
nf-test (modules/nf-core/bismark/report, conda)
4m 13s
nf-test (modules/nf-core/bismark/report, conda)
4m 13s
nf-test (modules/nf-core/bismark/report, docker_self_hosted)
2m 24s
nf-test (modules/nf-core/bismark/report, docker_self_hosted)
2m 24s
nf-test (modules/nf-core/bismark/report, singularity)
2m 31s
nf-test (modules/nf-core/bismark/report, singularity)
2m 31s
nf-test (modules/nf-core/bismark/deduplicate, conda)
2m 56s
nf-test (modules/nf-core/bismark/deduplicate, conda)
2m 56s
nf-test (modules/nf-core/bismark/deduplicate, docker_self_hosted)
1m 53s
nf-test (modules/nf-core/bismark/deduplicate, docker_self_hosted)
1m 53s
nf-test (modules/nf-core/bismark/deduplicate, singularity)
1m 10s
nf-test (modules/nf-core/bismark/deduplicate, singularity)
1m 10s
nf-core-lint-modules (bismark/align)
1m 22s
nf-core-lint-modules (bismark/align)
1m 22s
nf-test (modules/nf-core/bismark/summary, conda)
3m 33s
nf-test (modules/nf-core/bismark/summary, conda)
3m 33s
nf-test (modules/nf-core/bismark/summary, docker_self_hosted)
1m 56s
nf-test (modules/nf-core/bismark/summary, docker_self_hosted)
1m 56s
nf-test (modules/nf-core/bismark/summary, singularity)
2m 44s
nf-test (modules/nf-core/bismark/summary, singularity)
2m 44s
nf-test (modules/nf-core/bismark/methylationextractor, conda)
3m 48s
nf-test (modules/nf-core/bismark/methylationextractor, conda)
3m 58s
nf-test (modules/nf-core/bismark/methylationextractor, docker_self_hosted)
1m 43s
nf-test (modules/nf-core/bismark/methylationextractor, docker_self_hosted)
1m 43s
nf-test (modules/nf-core/bismark/methylationextractor, singularity)
2m 0s
nf-test (modules/nf-core/bismark/methylationextractor, singularity)
2m 0s
nf-test (modules/nf-core/bismark/genomepreparation, conda)
1m 33s
nf-test (modules/nf-core/bismark/genomepreparation, conda)
3m 7s
nf-test (modules/nf-core/bismark/genomepreparation, docker_self_hosted)
1m 40s
nf-test (modules/nf-core/bismark/genomepreparation, docker_self_hosted)
1m 40s
nf-test (modules/nf-core/bismark/genomepreparation, singularity)
1m 55s
nf-test (modules/nf-core/bismark/genomepreparation, singularity)
1m 55s
nf-test (modules/nf-core/bismark/align, conda)
5m 44s
nf-test (modules/nf-core/bismark/align, conda)
8m 21s
nf-test (modules/nf-core/bismark/align, docker_self_hosted)
4m 35s
nf-test (modules/nf-core/bismark/align, docker_self_hosted)
4m 35s
nf-test (modules/nf-core/bismark/align, singularity)
4m 30s
nf-test (modules/nf-core/bismark/align, singularity)
4m 30s
confirm-pass
2s
confirm-pass
1s
2h 28m 8s