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Add samtools sort and unzip to stress test
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adamrtalbot authored and edmundmiller committed Sep 30, 2024
1 parent d0caf9e commit 164498a
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Showing 2 changed files with 5 additions and 3 deletions.
3 changes: 2 additions & 1 deletion modules/nf-core/samtools/sort/tests/main.nf.test
Original file line number Diff line number Diff line change
Expand Up @@ -15,6 +15,7 @@ nextflow_process {
when {
process {
"""
// testy mctestface
input[0] = Channel.of([
[ id:'test', single_end:false ], // meta map
file(params.modules_testdata_base_path + 'genomics/sarscov2/illumina/bam/test.paired_end.bam', checkIfExists: true)
Expand Down Expand Up @@ -125,4 +126,4 @@ nextflow_process {
)
}
}
}
}
5 changes: 3 additions & 2 deletions modules/nf-core/unzip/tests/main.nf.test
Original file line number Diff line number Diff line change
Expand Up @@ -13,6 +13,7 @@ nextflow_process {
when {
process {
"""
// testy mctestface
input[0] = [
[ id: 'hello' ],
file(params.modules_testdata_base_path + 'generic/tar/hello.tar.gz', checkIfExists: true)
Expand All @@ -25,7 +26,7 @@ nextflow_process {
assertAll(
{ assert process.success },
{ assert snapshot(process.out).match() }
)
)
}
}

Expand All @@ -51,4 +52,4 @@ nextflow_process {
)
}
}
}
}

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