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fix: multiqc file collection #6074

Merged
merged 1 commit into from
Aug 1, 2024
Merged

fix: multiqc file collection #6074

merged 1 commit into from
Aug 1, 2024

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MarieLataretu
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  • removed meta map from Kraken2 report for the multiqc channel
  • updated snapshot file
  • fixed formatting

PR checklist

  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For subworkflows:
      • nf-core subworkflows test <SUBWORKFLOW> --profile docker
      • nf-core subworkflows test <SUBWORKFLOW> --profile singularity
      • nf-core subworkflows test <SUBWORKFLOW> --profile conda

@MarieLataretu
fixed multiqc file collection
ef1874c 
- removed meta map from kraken report for the multiqc channel
- updated snapshot file
- fixed formatting
@MarieLataretu MarieLataretu requested a review from a team as a code owner July 31, 2024 15:47
@MarieLataretu MarieLataretu requested review from kpadm and removed request for a team July 31, 2024 15:47
@MarieLataretu MarieLataretu added this pull request to the merge queue Aug 1, 2024
Merged via the queue into nf-core:master with commit a16e02e Aug 1, 2024
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@MarieLataretu MarieLataretu deleted the fix_multiqc-collection-fastq_extract_kraken_krakentools branch August 1, 2024 11:45
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@jfy133 jfy133 jfy133 approved these changes

@kpadm kpadm Awaiting requested review from kpadm kpadm was automatically assigned from nf-core/nf-test

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@MarieLataretu @jfy133