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Sentieon/Haplotyper: Recal table is sample specific #6078

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merged 2 commits into from
Aug 1, 2024

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FriederikeHanssen
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@FriederikeHanssen FriederikeHanssen commented Aug 1, 2024

PR adds recalibration as part of the sample-specific input instead of a general input, since each sample has its own recalibration table generated upstream by sentieon/qualcal.

Without the changes the recalibration table can't be matched to the sample.

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Update the PR description please.

@FriederikeHanssen FriederikeHanssen added this pull request to the merge queue Aug 1, 2024
Merged via the queue into master with commit ac3e442 Aug 1, 2024
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@FriederikeHanssen FriederikeHanssen deleted the fix_haplotyper branch August 1, 2024 13:34
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2 participants